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Published on: October 28, 2021
Characterization of a novel mitovirus isolated from the phytopathogenic fungus Fusarium pseudograminearum
Guoping Ma1, Bo Zhang1, Kai Qi1
1Institute of Plant Protection, Shandong Academy of Agricultural Sciences/Shandong Key Laboratory of Plant Virology, Jinan, 250100, People's Republic of China.
Abstract:
Mycoviruses are widespread in all major groups of plant-pathogenic fungi. So far, only one mycovirus has been reported to be associated with Fusarium pseudograminearum, the causal agent of Fusarium crown rot of wheat. In this study, a double-stranded RNA (dsRNA) segment was isolated from F. pseudograminearum strain JW2-1, and the sequence of its full-length cDNA (3077 nucleotides) was determined. Sequence analysis using the fungal mitochondrial genetic code (UGA coding for tryptophan) indicated that a single large open reading frame (ORF) is present on the positive strand of this dsRNA segment. The ORF encodes a putative RNA-dependent RNA polymerase (RdRp) of 748 amino acids (aa) with a molecular mass of 83.46 kDa. BLASTp analysis revealed that its aa sequence was 28.49-44.03% identical to those of viruses of the family Mitoviridae, with the most similarity to the corresponding RdRp sequences of Ophiostoma mitovirus 1c (44.03% identity) and Ophiostoma mitovirus 1b (40.33% identity). Phylogenetic analysis showed that this mycovirus, designated as "Fusarium pseudograminearum mitovirus 1" (FpgMV1), should be classified as a member of a new species in the earlier proposed genus "Duamitovirus" within the family Mitoviridae. To our best of our knowledge, this is the first report of a mitovirus infecting F. pseudograminearum.
Insights
This study identifies a novel mitovirus, Fusarium pseudograminearum mitovirus 1 (FpgMV1), in the wheat pathogen Fusarium pseudograminearum. This discovery expands our understanding of mycovirus diversity in plant-pathogenic fungi.
Area of Science:
- Mycology
- Virology
- Plant Pathology
Background:
- Mycoviruses are prevalent in plant-pathogenic fungi.
- Fusarium pseudograminearum, a cause of wheat crown rot, has had limited prior mycovirus association.
- Understanding mycovirus diversity is crucial for fungal biology and disease management.
Purpose of the Study:
- To identify and characterize novel mycoviruses in Fusarium pseudograminearum.
- To determine the genetic makeup and phylogenetic placement of a newly discovered mycovirus.
- To report the first instance of a mitovirus infecting F. pseudograminearum.
Main Methods:
- Isolation and sequencing of a double-stranded RNA (dsRNA) segment from F. pseudograminearum.
- Bioinformatic analysis, including open reading frame (ORF) prediction and sequence homology searches (BLASTp).
- Phylogenetic analysis to determine viral classification.
Main Results:
- A novel dsRNA segment was isolated and sequenced, revealing a full-length cDNA of 3077 nucleotides.
- Sequence analysis identified a large ORF encoding a putative RNA-dependent RNA polymerase (RdRp).
- The mycovirus, named Fusarium pseudograminearum mitovirus 1 (FpgMV1), shows significant sequence similarity to mitoviruses and is proposed as a new species within the Duamitovirus genus.
Conclusions:
- FpgMV1 represents the first reported mitovirus infecting Fusarium pseudograminearum.
- The findings contribute to the understanding of mycovirus diversity and evolution within the family Mitoviridae.
- This discovery opens avenues for further research into the biological roles and impacts of FpgMV1 in its host fungus.
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