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Diverse Molecular Mechanisms Underlying Pathogenic Protein Mutations: Beyond the Loss-of-Function Paradigm
Lisa Backwell1, Joseph A Marsh1
1MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, United Kingdom;
Abstract:
Most known disease-causing mutations occur in protein-coding regions of DNA. While some of these involve a loss of protein function (e.g., through premature stop codons or missense changes that destabilize protein folding), many act via alternative molecular mechanisms and have dominant-negative or gain-of-function effects. In nearly all cases, these non-loss-of-function mutations can be understood by considering interactions of the wild-type and mutant protein with other molecules, such as proteins, nucleic acids, or small ligands and substrates. Here, we review the diverse molecular mechanisms by which pathogenic mutations can have non-loss-of-function effects, including by disrupting interactions, increasing binding affinity, changing binding specificity, causing assembly-mediated dominant-negative and dominant-positive effects, creating novel interactions, and promoting aggregation and phase separation. We believe that increased awareness of these diverse molecular disease mechanisms will lead to improved diagnosis (and ultimately treatment) of human genetic disorders.
Insights
Most genetic mutations causing disease disrupt protein function. This review explores how mutations alter protein interactions, leading to dominant-negative or gain-of-function effects, improving genetic disorder diagnosis and treatment.
Area of Science:
- Genetics
- Molecular Biology
- Biochemistry
Background:
- Most disease-causing mutations are in protein-coding DNA.
- Mutations can cause loss-of-function, dominant-negative, or gain-of-function effects.
- Understanding non-loss-of-function mechanisms is crucial for genetic disorder insights.
Purpose of the Study:
- To review diverse molecular mechanisms of non-loss-of-function mutations.
- To highlight how protein interactions are altered by pathogenic mutations.
- To emphasize the role of these mechanisms in genetic disease.
Main Methods:
- Literature review of pathogenic mutation mechanisms.
- Analysis of protein-protein, protein-nucleic acid, and protein-ligand interactions.
- Categorization of non-loss-of-function effects.
Main Results:
- Pathogenic mutations can disrupt interactions, alter binding affinity or specificity.
- Mutations can cause dominant-negative/positive effects via altered assembly.
- Novel interactions, aggregation, and phase separation are key mechanisms.
- Non-loss-of-function mutations impact protein interactions with various molecules.
Conclusions:
- Awareness of diverse molecular mechanisms enhances genetic disorder diagnosis.
- Understanding these mechanisms is vital for developing targeted treatments.
- Focusing on protein interaction alterations offers new diagnostic and therapeutic avenues.
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