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Published on: May 27, 2020
Computational optimal transport for molecular spectra: The semi-discrete case
Nathan A Seifert1, Kirill Prozument1, Michael J Davis1
1Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, USA.
Computational optimal transport offers a novel method for comparing discrete and continuous molecular spectra. This approach, termed semi-discrete optimal transport, accurately quantifies spectral differences and refines theoretical models.
Area of Science:
- Computational chemistry
- Spectroscopy
- Applied mathematics
Background:
- Comparing discrete theoretical spectra (e.g., stick spectra) to continuous experimental spectra is a significant challenge in molecular spectroscopy.
- Traditional methods like least-squares fitting can be difficult to apply due to the nature of continuous and discrete data.
- Optimal transport theory provides a mathematical framework for comparing probability distributions, which can be adapted for spectral analysis.
Purpose of the Study:
- To investigate the application of computational optimal transport for quantitatively comparing discrete and continuous molecular spectra.
- To introduce and explain the concept of semi-discrete optimal transport in the context of molecular spectroscopy.
- To demonstrate the utility of optimal transport distance for spectral analysis using synthetic and experimental data.
Main Methods:
- Utilizing the optimal transport distance, specifically tailored for the semi-discrete case, to compare spectral data.
- Developing a tutorial on applying semi-discrete optimal transport to molecular spectra.
- Analyzing synthetic spectra to understand the impact of frequency resolution on spectral comparison.
- Applying the method to compare a theoretical stick spectrum with an experimental electronic absorption spectrum of sulfur dioxide (SO2).
Main Results:
- The study demonstrates that optimal transport provides a robust metric for comparing discrete and continuous molecular spectra.
- Calculations show how the frequency resolution of continuous spectra influences the transport distance to discrete spectra.
- The optimal transport distance was successfully used to compare experimental and theoretical SO2 spectra.
- A refined theoretical value for the SO2 band origin was proposed, showing improved agreement with experimental observations.
Conclusions:
- Computational optimal transport, specifically semi-discrete optimal transport, is a powerful and versatile tool for quantitative spectral comparison.
- This method offers advantages over traditional techniques, particularly when dealing with discrete and continuous spectral data.
- The application to SO2 spectra highlights the potential for improving theoretical models and spectral analysis in computational chemistry and spectroscopy.
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