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Updated: Sep 27, 2025

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Development of multidrug-resistant Escherichia coli in some Egyptian veterinary farms
A A Samy1, Asmaa S Mansour1, Doaa D Khalaf1
1Department of Microbiology and Immunology, National Research Centre, Dokki, Cairo, Egypt.
Background And Aim:
Food of animal origin is considered a major source of foodborne diseases. In this context, multidrug-resistant (MDR) Escherichia coli pose a serious hazard to public health due to the consumption of food contaminated with antibiotics that are used for the treatment of various bacterial infections in farm animals. Therefore, this study aimed to determine the effect of the excessive use of antibiotics on the development of MDR E. coli strains in Egyptian poultry, dairy, and meat farms.
Materials And Methods:
A total of 1225 samples were randomly collected from poultry, dairy, and meat products intended for human consumption in different governorates. E. coli were isolated from the collected samples and subjected to biochemical identification and antibiotic sensitivity tests with antibiotics commonly used in human and veterinary medicine. Then, amoxicillin (AML)- and oxytetracycline (OT)-resistant E. coli isolates were subjected to a polymerase chain reaction test to detect the bla TEM and tetA genes, respectively.
Results:
E. coli were isolated from 132 out of 350, 148 out of 350, 177 out of 350, and 35 out of 175 poultry, milk, meat, and human samples, respectively. Most of the isolates expressed multidrug resistance, and resistance genes (bla TEM and tetA) were detected in all the tested AML- and OT-resistant E. coli isolates.
Conclusion:
Foods of animal origin may represent a source of MDR E. coli, which can be a major threat to public health.
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