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Updated: Sep 27, 2025

Dissection of Enhancer Function Using Multiplex CRISPR-based Enhancer Interference in Cell Lines
Published on: June 2, 2018
Multiplexed genome regulation in vivo with hyper-efficient Cas12a
Lucie Y Guo1,2, Jing Bian3, Alexander E Davis4
1Department of Bioengineering, Stanford University, Stanford, CA, USA. lucieguo@stanford.edu.
Scientists engineered a hyper-efficient CRISPR-Cas12a system, hyperCas12a, for enhanced gene therapy. This improved system shows greater efficacy in gene activation, editing, and repression for in vivo applications.
Area of Science:
- Molecular Biology
- Gene Editing Technologies
- Biotechnology
Background:
- Multiplexed gene modulation is essential for advanced gene therapy and cell engineering.
- CRISPR-Cas12a systems offer multi-locus targeting but suffer from low in vivo efficiency.
Purpose of the Study:
- To develop a hyper-efficient CRISPR-Cas12a variant for improved in vivo gene modulation.
- To assess the efficacy and safety of the engineered hyperCas12a system.
Main Methods:
- Structure-guided protein engineering of Lachnospiraceae bacterium Cas12a.
- Development of a catalytically dead hyperdCas12a variant for gene activation.
- In vivo testing in post-natal mouse retinas for gene activation and cell differentiation studies.
Main Results:
- The hyperCas12a variant demonstrated significantly enhanced gene activation efficiency, especially at low crRNA concentrations.
- The hyperdCas12a system showed comparable off-target effects to wild-type Cas12a.
- Simultaneous activation of Oct4, Sox2, and Klf4 genes in mouse retinas altered progenitor cell differentiation.
Conclusions:
- The hyperCas12a system provides a powerful and versatile tool for in vivo gene modulation.
- This enhanced CRISPR-Cas12a variant holds promise for broad gene therapy and cell engineering applications.
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