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Logistic regression models for patient-level prediction based on massive observational data: Do we need all data?

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Summary

Developing predictive models can use less data than expected. A fraction of available data can yield models with similar performance but reduced complexity, saving computational resources.

Keywords:
Learning curveLogistic regressionModel complexityObservational dataPrediction modelSample size

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Area of Science:

  • Health Informatics
  • Biostatistics
  • Machine Learning in Healthcare

Background:

  • Developing accurate predictive models in healthcare is crucial for clinical decision-making.
  • Optimizing sample size is essential to balance model performance, complexity, and computational cost.

Purpose of the Study:

  • To empirically determine adequate sample sizes for developing predictive models.
  • To guide sample size considerations by balancing model performance and complexity.

Main Methods:

  • Learning curves were generated for 17,248 prediction models across 81 prediction problems in depression and hypertension cohorts.
  • Adequate sample size was defined as the point where model performance reached maximum performance minus a small threshold.

Main Results:

  • A median reduction in observations ranged from 9.5% to 78.5% for thresholds of 0.001 to 0.02.
  • Median reduction in model predictors ranged from 8.6% to 68.3% for the same thresholds.
  • Substantial reductions in sample size and model complexity are achievable.

Conclusions:

  • A fraction of available data is often sufficient for developing high-performing predictive models.
  • Reduced sample sizes lead to substantially decreased model complexity and computational requirements.
  • Learning curves can enable significant model complexity reduction, varying by outcome.