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Published on: August 23, 2024
Disruption of dNTP homeostasis by ribonucleotide reductase hyperactivation overcomes AML differentiation blockade
Hanying Wang1,2, Xin He1, Lei Zhang1
1Department of Hematological Malignancies Translational Science, Gehr Family Center for Leukemia Research, Hematologic Malignancies and Stem Cell Transplantation Institute, Beckman Research Institute, City of Hope Medical Center, Duarte, CA.
Abstract:
Differentiation blockade is a hallmark of acute myeloid leukemia (AML). A strategy to overcome such a blockade is a promising approach against the disease. The lack of understanding of the underlying mechanisms hampers development of such strategies. Dysregulated ribonucleotide reductase (RNR) is considered a druggable target in proliferative cancers susceptible to deoxynucleoside triphosphate (dNTP) depletion. Herein, we report an unanticipated discovery that hyperactivating RNR enables differentiation and decreases leukemia cell growth. We integrate pharmacogenomics and metabolomics analyses to identify that pharmacologically (eg, nelarabine) or genetically upregulating RNR subunit M2 (RRM2) creates a dNTP pool imbalance and overcomes differentiation arrest. Moreover, R-loop-mediated DNA replication stress signaling is responsible for RRM2 activation by nelarabine treatment. Further aggravating dNTP imbalance by depleting the dNTP hydrolase SAM domain and HD domain-containing protein 1 (SAMHD1) enhances ablation of leukemia stem cells by RRM2 hyperactivation. Mechanistically, excessive activation of extracellular signal-regulated kinase (ERK) signaling downstream of the imbalance contributes to cellular outcomes of RNR hyperactivation. A CRISPR screen identifies a synthetic lethal interaction between loss of DUSP6, an ERK-negative regulator, and nelarabine treatment. These data demonstrate that dNTP homeostasis governs leukemia maintenance, and a combination of DUSP inhibition and nelarabine represents a therapeutic strategy.
Insights
Hyperactivating ribonucleotide reductase (RNR) promotes acute myeloid leukemia (AML) cell differentiation and growth reduction. This unexpected finding in AML treatment offers a new therapeutic strategy by targeting RNR and dNTP homeostasis.
Area of Science:
- Molecular Biology
- Cancer Research
- Hematology
Background:
- Acute myeloid leukemia (AML) is characterized by differentiation blockade, hindering effective treatment strategies.
- Dysregulated ribonucleotide reductase (RNR) is a potential therapeutic target in cancers sensitive to deoxynucleoside triphosphate (dNTP) depletion.
Purpose of the Study:
- To investigate the role of RNR in AML differentiation and identify novel therapeutic strategies.
- To elucidate the mechanisms by which RNR hyperactivation impacts leukemia cell growth and differentiation.
Main Methods:
- Integrated pharmacogenomic and metabolomic analyses to study RNR subunit M2 (RRM2) upregulation.
- Investigated R-loop-mediated DNA replication stress signaling and its role in RRM2 activation.
- Utilized CRISPR screening to identify synthetic lethal interactions with nelarabine treatment.
Main Results:
- Pharmacological or genetic upregulation of RRM2 induces dNTP pool imbalance, overcoming differentiation arrest in AML.
- Nelarabine treatment activates RRM2 via R-loop-mediated DNA replication stress signaling.
- Depleting SAMHD1 enhances RRM2-mediated ablation of leukemia stem cells, and ERK signaling activation contributes to these outcomes.
- A synthetic lethal interaction between DUSP6 loss and nelarabine treatment was identified.
Conclusions:
- Deoxynucleoside triphosphate (dNTP) homeostasis is critical for leukemia maintenance.
- Hyperactivating RNR represents a promising strategy to induce differentiation and reduce leukemia cell growth.
- Combining DUSP inhibition with nelarabine offers a potential therapeutic approach for AML.
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