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Updated: Sep 26, 2025

An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues
Published on: April 5, 2018
Dysregulated Epigenetics of Chordoma: Prognostic Markers and Therapeutic Targets
Kevin Tu1,2, Sang Lee3, Sanjit Roy1
1Division of Translational Radiation Sciences, Department of Radiation Oncology, University of Maryland, School of Medicine, Baltimore, MD 21201, USA.
Abstract:
Chordoma is a rare, slow-growing sarcoma that is locally aggressive and typically resistant to conventional chemo- and radiotherapies. Despite its low incidence, chordoma remains a clinical challenge because therapeutic options for chordoma are limited, and little is known about the molecular mechanisms involved in resistance to therapies. Furthermore, there are currently no established predictive or prognostic biomarkers to follow disease progression or treatment. Whole-genome sequencing of chordoma tissues has demonstrated a low-frequency mutation rate compared to other cancers. This has generated interest in the role of epigenetic events in chordoma pathogenesis. In this review, we discuss the current understanding of the epigenetic drivers of chordoma and their potential applications in prognosis and the development of new therapies.
Insights
Chordoma, a rare bone cancer, presents treatment challenges due to therapy resistance. This review explores epigenetic factors driving chordoma and their potential as biomarkers and therapeutic targets.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Chordoma is a rare, slow-growing sarcoma with limited therapeutic options.
- It is locally aggressive and often resistant to conventional chemo- and radiotherapy.
- Current understanding of chordoma pathogenesis and therapy resistance mechanisms is limited.
Purpose of the Study:
- To review the current understanding of epigenetic drivers in chordoma.
- To explore the potential of epigenetic modifications as prognostic biomarkers.
- To discuss the development of novel therapies targeting epigenetic pathways in chordoma.
Main Methods:
- Literature review of studies on chordoma epigenetics.
- Analysis of whole-genome sequencing data in chordoma.
- Discussion of potential therapeutic strategies targeting epigenetic alterations.
Main Results:
- Chordoma exhibits a low mutation rate, suggesting a significant role for epigenetic alterations.
- Epigenetic dysregulation is implicated in chordoma pathogenesis and progression.
- Specific epigenetic modifications may serve as predictive or prognostic biomarkers.
Conclusions:
- Epigenetic mechanisms are crucial in chordoma development and resistance to therapy.
- Targeting epigenetic pathways offers promising avenues for novel chordoma treatments.
- Further research into chordoma epigenetics is essential for improving patient outcomes.
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