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Updated: Sep 26, 2025

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
Published on: February 10, 2023
The transmission of human mitochondrial DNA in four-generation pedigrees
Qi Liu1,2, Muhammad Faaras Iqbal3,4, Tahir Yaqub5
1State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, China.
Abstract:
Most of the pathogenic variants in mitochondrial DNA (mtDNA) exist in a heteroplasmic state (coexistence of mutant and wild-type mtDNA). Understanding how mtDNA is transmitted is crucial for predicting mitochondrial disease risk. Previous studies were based mainly on two-generation pedigree data, which are limited by the randomness in a single transmission. In this study, we analyzed the transmission of heteroplasmies in 16 four-generation families. First, we found that 57.8% of the variants in the great grandmother were transmitted to the fourth generation. The direction and magnitude of the frequency change during transmission appeared to be random. Moreover, no consistent correlation was identified between the frequency changes among the continuous transmissions, suggesting that most variants were functionally neutral or mildly deleterious and thus not subject to strong natural selection. Additionally, we found that the frequency of one nonsynonymous variant (m.15773G>A) showed a consistent increase in one family, suggesting that this variant may confer a fitness advantage to the mitochondrion/cell. We also estimated the effective bottleneck size during transmission to be 21-71. In summary, our study demonstrates the advantages of multigeneration data for studying the transmission of mtDNA for shedding new light on the dynamics of the mutation frequency in successive generations.
Insights
Mitochondrial DNA (mtDNA) heteroplasmy transmission across four generations shows random frequency changes, with some variants potentially offering a fitness advantage. This multigenerational analysis provides new insights into mtDNA mutation dynamics.
Area of Science:
- Genetics
- Molecular Biology
- Evolutionary Biology
Background:
- Pathogenic mitochondrial DNA (mtDNA) variants often exist as heteroplasmies.
- Understanding mtDNA transmission is key for predicting mitochondrial disease risk.
- Previous studies lacked multigenerational data, limiting insights into transmission randomness.
Purpose of the Study:
- To analyze the transmission patterns of mtDNA heteroplasmies across four generations.
- To investigate the randomness and potential selection pressures on mtDNA variant frequencies during inheritance.
Main Methods:
- Analysis of mtDNA heteroplasmy transmission in 16 four-generation families.
- Quantification of variant frequency changes across generations.
- Estimation of effective bottleneck size during mtDNA transmission.
Main Results:
- 57.8% of variants from the great grandmother were transmitted to the fourth generation.
- Transmission direction and magnitude of variant frequencies were largely random.
- One nonsynonymous variant (m.15773G>A) showed consistent frequency increase in one family, suggesting a potential fitness advantage.
- Effective bottleneck size was estimated to be 21-71.
Conclusions:
- Multigeneration data reveal complex mtDNA heteroplasmy transmission dynamics.
- Most mtDNA variants appear neutral or mildly deleterious, lacking strong selection.
- Specific variants may confer a selective advantage, influencing their transmission.
- This study enhances understanding of mtDNA mutation frequency dynamics in inheritance.
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