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Deep learning-based motion artifact removal in functional near-infrared spectroscopy
Yuanyuan Gao1, Hanqing Chao2, Lora Cavuoto3
1Rensselaer Polytechnic Institute, Center for Modeling, Simulation and Imaging in Medicine, Troy, New York, United States.
Neurophotonics
|April 27, 2022
Summary
A new deep learning method using a denoising autoencoder (DAE) effectively removes motion artifacts from functional near-infrared spectroscopy (fNIRS) data. This assumption-free approach enhances data quality and computational efficiency for neuroimaging.
Area of Science:
- Neuroimaging
- Biomedical Engineering
- Machine Learning
Background:
- Functional near-infrared spectroscopy (fNIRS) is a valuable neuroimaging tool for monitoring brain activity in unconstrained subjects.
- Motion artifacts are a significant source of noise in fNIRS data, often requiring expert intervention and parameter tuning for removal.
- Existing methods for motion artifact correction in fNIRS are limited by their reliance on prior knowledge and post-hoc adjustments.
Purpose of the Study:
- To develop an assumption-free deep learning method for motion artifact removal in fNIRS data.
- To introduce the application of a denoising autoencoder (DAE) architecture for mitigating motion artifacts in fNIRS.
- To establish a novel approach for enhancing the interpretability of fNIRS recordings.
Main Methods:
- A deep learning approach utilizing a denoising autoencoder (DAE) was developed for motion artifact removal.
- A specialized loss function was designed to facilitate the training of the DAE model.
- Synthetic fNIRS data mimicking real-world signal properties were generated for model training and validation.
Main Results:
- The DAE model demonstrated superior performance compared to conventional methods in reducing residual motion artifacts.
- The proposed method achieved a lower mean squared error, indicating improved signal fidelity.
- The deep learning approach significantly increased computational efficiency for artifact removal.
Conclusions:
- Deep learning models, specifically DAEs, show significant potential for accurate and efficient motion artifact removal in fNIRS data.
- This assumption-free method offers a robust alternative to existing artifact correction techniques.
- The findings pave the way for more reliable and accessible analysis of fNIRS neuroimaging data.

