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Comparative Proteomic Analysis of Whole Kidney, Medulla, and Cortical Tubules in Diabetic Pathogenesis of Kidney Injury in Mice
Published on: May 2, 2025
Activation of Complement Pathways in Kidney Tissue May Mediate Tubulointerstitial Injury in Diabetic Nephropathy
Shimin Jiang1, Yuanyuan Jiao2, Guming Zou1
1Department of Nephrology, China-Japan Friendship Hospital, Beijing, China.
Introduction:
Key genes involved in tubulointerstitial injury may influence the development and progression of diabetic nephropathy (DN). We investigated whether complement-related genes are linked to the mechanism underlying tubulointerstitial injury in DN.
Methods:
We analyzed the microarray data of 17 tubulointerstitial tissue samples from DN patients and 21 normal controls from the Gene Expression Omnibus. A gene co-expression network was constructed, and genes were divided into modules by weighted gene co-expression network analysis (WGCNA). We also investigated the association of C3 and C1q deposits in kidney tissues with a composite outcome of end-stage renal disease or a 50% reduction in the estimated glomerular filtration rate (eGFR) in DN patients. Finally, we performed immunohistochemical analyses of C3, C1q, C5b-9, mannose-binding lectin (MBL), and factor B in kidney tissues.
Results:
Nine co-expression modules were constructed using 12,075 genes from the 38 human tubulointerstitial tissue samples. Black module with more genes was positively correlated with tubulointerstitial injury in DN. C3, one of the top 10 genes in tubulointerstitial injury, was verified in an independent dataset; C3 was significantly overexpressed in tubulointerstitial tissue from patients with DN compared to the normal controls. The mRNA level of C3 in renal tubulointerstitium was negatively correlated with eGFR in DN patients (r = -0.75; p = 0.001). Analysis of the follow-up data of 54 DN patients demonstrated that codeposits of C3 and C1q in kidney tissues were independently associated with the renal outcome in DN (hazard ratio, 2.3, 95% confidence interval, 1.01-5.2, p < 0.05). Immunohistochemical analysis showed that patients with higher C1q, C3, C5b-9, MBL, or factor B expression in renal tubulointerstitium were more likely to progress to kidney failure.
Conclusion:
Local complement activation of the classical, lectin and alternative pathways appears linked to tubulointerstitial injury and disease progression in DN.
Insights
Complement activation, specifically involving C3 and C1q deposits, is linked to tubulointerstitial injury and kidney function decline in diabetic nephropathy (DN). This suggests complement pathways are key drivers of DN progression.
Area of Science:
- Nephrology
- Immunology
- Genetics
Background:
- Diabetic nephropathy (DN) involves tubulointerstitial injury, a key factor in disease progression.
- Complement-related genes may play a role in the mechanisms underlying tubulointerstitial injury in DN.
Purpose of the Study:
- To investigate the association between complement-related genes and tubulointerstitial injury in DN.
- To explore the link between complement pathway activation and DN progression.
Main Methods:
- Weighted gene co-expression network analysis (WGCNA) of microarray data from DN patients and controls.
- Analysis of C3 and C1q deposits in kidney tissues and their association with renal outcomes.
- Immunohistochemical analysis of complement factors (C3, C1q, C5b-9, MBL, factor B) in renal tubulointerstitium.
Main Results:
- A gene co-expression network identified a 'black module' positively correlated with tubulointerstitial injury.
- C3 was significantly overexpressed in DN tubulointerstitial tissue and negatively correlated with estimated glomerular filtration rate (eGFR).
- Codeposits of C3 and C1q were independently associated with adverse renal outcomes in DN patients; higher expression of C1q, C3, C5b-9, MBL, or factor B correlated with kidney failure.
Conclusions:
- Local complement activation via classical, lectin, and alternative pathways is implicated in tubulointerstitial injury and DN progression.
- Complement components like C3 and C1q are potential biomarkers for DN progression and renal outcomes.
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