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Published on: October 20, 2016
Serum Proteomic Analysis by Tandem Mass Tag-Based Quantitative Proteomics in Pediatric Obstructive Sleep Apnea
Hanrong Cheng1, Shoumei Jin2, Simin Huang2
1Institute of Respiratory Diseases, Shenzhen People's Hospital, The Second Clinical Medical College of Jinan University, The First Affiliated Hospital of Southern University of Science and Technology, Shenzhen, China.
Insights
This study identified novel protein biomarkers in children with obstructive sleep apnea (OSA). These findings shed light on OSA
Area of Science:
- Proteomics
- Pediatric Medicine
- Respiratory Disorders
Background:
- Pediatric obstructive sleep apnea (OSA) affects 3-6% of children, but its pathophysiology is not fully understood.
- Proteomic analysis offers a powerful tool to investigate complex diseases like OSA.
Purpose of the Study:
- To identify differentially expressed serum proteins in pediatric OSA patients using tandem mass tag (TMT)-based proteomic analysis.
- To explore potential molecular pathways involved in OSA pathophysiology.
Main Methods:
- Tandem mass tag (TMT)-based proteomic analysis of serum samples from pediatric OSA patients.
- Bioinformatic pathway enrichment analysis.
- Experimental validation of identified protein candidates.
Main Results:
- Proteomic analysis revealed differentially expressed proteins in pediatric OSA patients.
- Enriched pathways included phagosome, glycan metabolism, immune response, and hedgehog signaling.
- Six proteins (ANTXR1, COLEC10, NCAM1, VNN1, MAN1A1, CSPG4) showed altered levels correlating with OSA severity and apnea-hypopnea index (AHI).
Conclusions:
- This study is the first to use TMT-based proteomics to identify serum protein differences in pediatric OSA of varying severity.
- Identified proteins and pathways offer new insights into OSA pathophysiology.
- Six specific proteins warrant further investigation for their role in pediatric OSA.
Abstract:
Pediatric obstructive sleep apnea (OSA) is a frequent respiratory disorder with an estimated prevalence of 3-6% in the general population. However, the underlying pathophysiology of OSA remains unclear. Recently, proteomic analysis using high-resolution and high-throughput mass spectrometry has been widely used in the field of medical sciences. In the present study, tandem mass tag (TMT)-based proteomic analysis was performed in the serum of patients with OSA. The proteomic analysis revealed a set of differentially expressed proteins that may be associated with the pathophysiology of OSA. The differentially expressed proteins in patients with OSA were enriched in pathways including phagosome and glycan synthesis/degradation, immune response, and the hedgehog signaling pathway, indicating that such functions are key targets of OSA. Moreover, the experimental validation studies revealed that four proteins including ANTXR1, COLEC10, NCAM1, and VNN1 were reduced in the serum from patients with moderate and severe OSA, while MAN1A1 and CSPG4 protein levels were elevated in the serum from patients with severe OSA. The protein levels of ANTXR1, COLEC10, NCAM1, and VNN1 were inversely correlated with apnea-hypopnea index (AHI) in the recruited subjects, while the protein level of MAN1A1 was positively correlated with AHI, and no significant correlation was detected between CSPG4 protein and AHI. In summary, the present study for the first time identified differentially expressed proteins in the serum from OSA patients with different severities by using TMT-based proteomic analysis. The functional enrichment studies suggested that several signaling pathways may be associated with the pathophysiology of OSA. The experimental validation results indicated that six proteins including ANTXR1, COLEC10, NCAM1, VNN1, CGPG4, and MAN1A1 may play important roles in the pathophysiology of OSA, which requires further mechanistic investigation.
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