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Updated: Sep 25, 2025

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Protein Engineering by Yeast Surface Display
Published on: November 29, 2024
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Antibody Library Screening Using Yeast Biopanning and Fluorescence-Activated Cell Sorting.
Stefania C Carrara1,2, Jan P Bogen1,2, Julius Grzeschik2
1Institute for Organic Chemistry and Biochemistry, Technische Universität Darmstadt, Darmstadt, Germany.
Methods in Molecular Biology (Clifton, N.J.)
|April 28, 2022
Summary
Yeast surface display (YSD) with FACS-assisted biopanning enables isolation of high-affinity monoclonal antibodies (mAbs) against challenging targets. This method uses mammalian cells to ensure antigen accessibility and proper conformation for antibody binding.
Area of Science:
- Biotechnology
- Immunology
- Molecular Biology
Background:
- Yeast surface display (YSD) is a key screening method for isolating monoclonal antibodies (mAbs).
- Phage display is currently the gold standard for isolating mAbs against difficult targets like GPCRs and ion channels.
- Limitations exist in current methods for antibody discovery against complex membrane proteins.
Purpose of the Study:
- To establish and detail a protocol for isolating mAbs using YSD with FACS-assisted biopanning.
- To demonstrate the isolation of high-affinity antibodies binding antigens in their native cellular environment.
- To highlight essential characterization methods for antibodies generated via this YSD approach.
Main Methods:
- Development of a step-by-step protocol for YSD biopanning.
- Utilizing fluorescence-activated cell sorting (FACS) for enrichment of antibody-displaying yeast cells.
- Employing antigen-displaying mammalian cells to ensure correct antigen conformation and epitope accessibility.
Main Results:
- Successful isolation of diverse antibodies with high affinity for their respective antigens.
- Demonstration of antibody binding within the natural cellular context of the target antigen.
- Validation of the FACS-assisted YSD approach for antibody discovery.
Conclusions:
- FACS-assisted YSD provides a robust method for isolating high-affinity mAbs against challenging targets.
- The use of mammalian cells in YSD biopanning ensures antigen integrity and facilitates antibody discovery.
- This protocol offers a valuable alternative for antibody generation, particularly for membrane proteins.

