Identification of novel and potent PROTACs targeting FAK for non-small cell lung cancer: Design, synthesis, and

Yin Sun1, Ruifeng Wang2, Yu Sun1

  • 1Key Laboratory of Structure-Based Drug Design and Discovery, Ministry of Education, School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe District, Shenyang, 110016, PR China.

Insights

Novel PROTACs targeting Focal Adhesion Kinase (FAK) effectively degrade the protein, inhibiting cancer cell growth and migration. PROTAC B5 shows potent anti-cancer activity and promising drug-like properties for further development.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Oncology

Background:

  • Focal Adhesion Kinase (FAK) is a non-receptor tyrosine kinase crucial for tumor progression, mediating survival, invasion, metastasis, and angiogenesis.
  • Inhibiting FAK kinase activity alone is insufficient; both kinase and scaffolding functions must be addressed for complete signaling blockade.
  • Proteolysis Targeting Chimera (PROTAC) technology offers a method to induce protein degradation, simultaneously eliminating both enzymatic and scaffolding functions.

Purpose of the Study:

  • To design and synthesize novel FAK PROTACs to degrade FAK protein.
  • To evaluate the efficacy of FAK PROTACs in inhibiting cancer cell proliferation, migration, and invasion.
  • To assess the preliminary drug-like properties of the lead FAK PROTAC compound.

Main Methods:

  • Design and synthesis of a series of FAK PROTACs.
  • Biochemical assays to determine FAK affinity (IC50).
  • Cell-based assays to measure FAK degradation, antiproliferative activity, and inhibition of cell migration/invasion in A549 cells.
  • In vitro evaluation of plasma stability and membrane permeability.

Main Results:

  • The optimal PROTAC, B5, demonstrated potent FAK affinity with an IC50 of 14.9 nM.
  • PROTAC B5 achieved significant FAK degradation (86.4% at 10 nM) in A549 cells.
  • PROTAC B5 exhibited potent antiproliferative activity (IC50 = 0.14 ± 0.01 μM) and inhibited cell migration and invasion.
  • Preliminary in vitro studies indicated outstanding plasma stability and moderate membrane permeability for PROTAC B5.

Conclusions:

  • FAK PROTAC B5 is a promising lead compound for cancer drug discovery.
  • This study highlights the potential of PROTAC technology for targeting FAK's dual functions.
  • Further exploration of FAK-degradation functions using PROTACs is warranted for cancer therapy development.