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A Soft Labeling Approach to Develop Automated Algorithms that Incorporate Uncertainty in Pulmonary Opacification on

Keegan Lensink1, Fu Jorden Lo2, Rachel L Eddy3

  • 1Department of Earth, Ocean, and Atmospheric Sciences, University of British Columbia, Vancouver, BC, Canada.

Academic Radiology
|April 30, 2022
PubMed
Summary

This study introduces a soft labeling method for chest CT scans, improving automated quantification of lung opacification and reducing labeling burden. The new approach enhances accuracy in classifying and measuring pulmonary opacities.

Keywords:
chest CTpulmonary opacificationsoft labelinguncertainty

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Area of Science:

  • Radiology and Medical Imaging
  • Artificial Intelligence in Medicine
  • Computational Pathology

Background:

  • Automated algorithm training relies on binary labels, which cannot capture uncertainty.
  • Pulmonary opacification quantification on chest CT is crucial for diagnosis and monitoring.
  • Existing labeling methods present challenges in handling inter-user variability and labeling burden.

Purpose of the Study:

  • To propose and evaluate a soft labeling methodology for quantifying pulmonary opacification and percent well-aerated lung (%WAL) on chest CT.
  • To address the limitations of hard labeling by incorporating uncertainty in segmentation.
  • To reduce the overall labeling burden in medical image analysis.

Main Methods:

  • Retrospective analysis of 760 COVID-19 chest CT scans from five international centers.
  • Creation of pixel-wise labels for over 27,000 axial slices, classifying three opacification patterns.
  • Quantification of %WAL and inter-user hard label variability using Shannon entropy.
  • Implementation of a soft labeling and modeling cycle and comparison with hard labeling performance metrics.

Main Results:

  • Hard labels showed significant inter-user variability, with only 3.37% pixel agreement among radiologists.
  • The soft labeling approach significantly increased point-wise accuracy from 60.0% to 84.3% (p=0.01) for opacification prediction.
  • The soft label model showed strong correlation for %WAL prediction (R=0.900), outperforming the hard label model (R=0.856).

Conclusions:

  • Soft labeling enhances automated quantification and classification accuracy of pulmonary opacification on chest CT.
  • The developed soft labeling methodology shows broad applicability for various pulmonary opacification contexts.
  • This work provides a foundation for future advancements in medical image analysis using soft labeling techniques.