Related Experiment Video
Updated: Sep 24, 2025

Anesthesia-free Heartbeat Measurements in Freely Moving Zebrafish
Published on: April 18, 2025
An accelerometer-derived ballistocardiogram method for detecting heart rate in free-ranging marine mammals
Max F Czapanskiy1, Paul J Ponganis2, James A Fahlbusch1
1Hopkins Marine Station, Department of Biology, Stanford University, Pacific Grove, CA 93950, USA.
Abstract:
Physio-logging methods, which use animal-borne devices to record physiological variables, are entering a new era driven by advances in sensor development. However, existing datasets collected with traditional bio-loggers, such as accelerometers, still contain untapped eco-physiological information. Here, we present a computational method for extracting heart rate from high-resolution accelerometer data using a ballistocardiogram. We validated our method with simultaneous accelerometer-electrocardiogram tag deployments in a controlled setting on a killer whale (Orcinus orca) and demonstrate the predictions correspond with previously observed cardiovascular patterns in a blue whale (Balaenoptera musculus), including the magnitude of apneic bradycardia and increase in heart rate prior to and during ascent. Our ballistocardiogram method may be applied to mine heart rates from previously collected accelerometery data and expand our understanding of comparative cardiovascular physiology.

