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Published on: August 20, 2019
De novo variants in the PABP domain of PABPC1 lead to developmental delay
Meret Wegler1, Xiangbin Jia2, Marielle Alders3
1Institute of Human Genetics, University Medical Center, Leipzig, Germany.
Insights
Genetic variants in PABPC1 are linked to developmental delay (DD) by impairing neural progenitor cell proliferation and neurogenesis. These findings highlight PABPC1
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- Developmental delay (DD) is a complex condition with diverse etiologies.
- Understanding the genetic underpinnings of DD is crucial for diagnosis and potential therapies.
Purpose of the Study:
- To investigate the role of Poly(A)-binding protein 1 (PABPC1) in developmental delay.
- To identify the functional impact of PABPC1 variants found in individuals with DD.
Main Methods:
- Exome sequencing and bioinformatics analysis to identify PABPC1 variants.
- In silico molecular modeling and coimmunoprecipitation to assess protein interactions.
- In utero electroporation in mouse embryos to study PABPC1 function in neurogenesis.
Main Results:
- Four probands presented with DD, expressive speech delay, autistic features, seizures, and behavioral disorders due to heterozygous de novo PABPC1 variants.
- Variants clustered in the PABP domain, predicted to reduce binding affinity to RNA metabolism proteins like PAIP2.
- Coimmunoprecipitation confirmed weakened PABPC1-PAIP2 interaction. PABPC1 knockdown in mouse embryos reduced neural progenitor cell proliferation, with most variants failing to rescue this effect.
Conclusions:
- Pathogenic variants in the PABPC1 PABP domain contribute to DD.
- These variants likely impair neurogenesis during cortical development by interfering with translation initiation.
Purpose:
The study aimed to investigate the role of PABPC1 in developmental delay (DD).
Methods:
Children were examined by geneticists and pediatricians. Variants were identified using exome sequencing and standard downstream bioinformatics pipelines. We performed in silico molecular modeling and coimmunoprecipitation to test if the variants affect the interaction between PABPC1 and PAIP2. We performed in utero electroporation of mouse embryo brains to enlighten the function of PABPC1.
Results:
We describe 4 probands with an overlapping phenotype of DD, expressive speech delay, and autistic features and heterozygous de novo variants that cluster in the PABP domain of PABPC1. Further symptoms were seizures and behavioral disorders. Molecular modeling predicted that the variants are pathogenic and would lead to decreased binding affinity to messenger RNA metabolism-related proteins, such as PAIP2. Coimmunoprecipitation confirmed this because it showed a significant weakening of the interaction between mutant PABPC1 and PAIP2. Electroporation of mouse embryo brains showed that Pabpc1 knockdown decreases the proliferation of neural progenitor cells. Wild-type Pabpc1 could rescue this disturbance, whereas 3 of the 4 variants did not.
Conclusion:
Pathogenic variants in the PABP domain lead to DD, possibly because of interference with the translation initiation and subsequently an impaired neurogenesis in cortical development.
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