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Types of RNA01:23

Types of RNA

68.1K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
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Peptidoglycan Synthesis01:28

Peptidoglycan Synthesis

550
Structure of PeptidoglycanPeptidoglycan is a vital structural component of the bacterial cell wall, providing mechanical strength and shape to the cell. It consists of repeating units of two sugars—N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM)—linked by β-1,4 glycosidic bonds. These sugar chains are cross-linked by short peptide chains, forming a mesh-like polymer that surrounds the bacterial plasma membrane.Cytoplasmic Phase – Precursor SynthesisPeptidoglycan...
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Bacterial Protein Maturation01:26

Bacterial Protein Maturation

113
Bacterial protein maturation is a tightly regulated process that ensures newly synthesized polypeptides achieve correct functional conformations. This maturation involves a series of modifications, folding events, and quality control steps, often assisted by specialized chaperone proteins.N-Terminal ModificationsThe maturation of bacterial polypeptides begins cotranslationally as the polypeptide exits the ribosome. The first amino acid, N-formylmethionine (fMet), is typically modified at the...
113
Peptide Bonds02:43

Peptide Bonds

77.9K
A peptide bond covalently attaches amino acids through a dehydration reaction. One amino acid's carboxyl group and another amino acid's amino group combine, releasing a water molecule. The resulting bond is the peptide bond. The products that such linkages form are peptides. As more amino acids join this growing chain, the resulting chain is a polypeptide. Each polypeptide has a free amino group at one end. This end has the N-terminal, or the amino-terminal, and the other end has a free...
77.9K
Nucleic Acid Structure01:25

Nucleic Acid Structure

7.3K
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms  a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA...
7.3K
Leaky Scanning02:28

Leaky Scanning

5.3K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.3K

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Related Experiment Video

Updated: Sep 24, 2025

Development of a Backbone Cyclic Peptide Library as Potential Antiparasitic Therapeutics Using Microwave Irradiation
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Development of a Backbone Cyclic Peptide Library as Potential Antiparasitic Therapeutics Using Microwave Irradiation

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RNA-Binding Macrocyclic Peptides.

Sunit Pal1, Peter 't Hart1

  • 1Chemical Genomics Centre of the Max Planck Society, Max Planck Institute of Molecular Physiology, Dortmund, Germany.

Frontiers in Molecular Biosciences
|May 6, 2022
PubMed
Summary
This summary is machine-generated.

Cyclic peptides show promise as therapeutic ligands for RNA targets. This review explores their discovery, properties, and potential for developing new RNA-targeting drugs.

Keywords:
RNA bindingmacrocyclic peptidesnatural productspeptide library screeningstructure-based design

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Last Updated: Sep 24, 2025

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Area of Science:

  • Medicinal Chemistry
  • Molecular Biology
  • Drug Discovery

Background:

  • Targeting RNA with small molecules offers significant therapeutic potential.
  • RNA's structural flexibility and limited chemical diversity present challenges for selective ligand design.
  • Cyclic peptides are emerging as a promising class of molecules for RNA targeting.

Purpose of the Study:

  • To review existing cyclic peptide ligands for therapeutically relevant RNA targets.
  • To discuss methodologies employed in the discovery of these ligands.
  • To provide insights into the essential properties for potent and selective RNA-peptide interactions.

Main Methods:

  • Literature review of reported cyclic peptide-RNA interactions.
  • Analysis of discovery strategies, including screening and design approaches.
  • Evaluation of physicochemical and structural properties influencing binding affinity and selectivity.

Main Results:

  • Several cyclic peptides have been identified as ligands for various RNA targets.
  • Diverse methods, from high-throughput screening to rational design, are utilized for discovery.
  • Key properties for effective RNA binding by cyclic peptides include conformational rigidity and specific interaction motifs.

Conclusions:

  • Cyclic peptides represent a viable strategy for developing novel RNA-targeting therapeutics.
  • Further research into optimizing cyclic peptide design and understanding RNA-ligand interactions is warranted.
  • Lessons learned from current examples can guide the development of next-generation potent and selective RNA ligands.