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Updated: Sep 24, 2025

A Reporter Based Cellular Assay for Monitoring Splicing Efficiency
Published on: September 15, 2021
The splicing-regulatory lncRNA NTRAS sustains vascular integrity
Youssef Fouani1,2,3, Luisa Kirchhof1,2,3, Laura Stanicek1,4
1Institute of Cardiovascular Regeneration, Centre of Molecular Medicine, Goethe University, Frankfurt, Germany.
The long non-coding RNA NTRAS maintains vascular integrity by regulating the splicing of tight junction protein 1 (TJP1). Loss of NTRAS increases vascular permeability and lethality, highlighting its critical role.
Area of Science:
- Molecular Biology
- Genetics
- Cardiovascular Biology
Background:
- Vascular integrity is crucial for organ function, preventing edema and inflammation.
- Long non-coding RNAs (lncRNAs) are key gene expression regulators with cell-specific roles.
Purpose of the Study:
- Identify novel endothelial-enriched lncRNAs controlling vascular function.
- Investigate the role of the lncRNA NTRAS in maintaining endothelial cell homeostasis and vascular integrity.
Main Methods:
- Screening for endothelial-specific lncRNAs.
- In vitro silencing of NTRAS in endothelial cells.
- Biochemical analysis of NTRAS-hnRNPL interactions.
- Generation and analysis of Ntras∆CA/∆CA mutant mice.
- Assessment of vascular permeability, gene splicing, and organ pathology.
Main Results:
- NTRAS was identified as an endothelial-enriched lncRNA regulating endothelial cell function.
- NTRAS silencing led to endothelial dysfunction, increased vascular permeability, and lethality in mice.
- NTRAS sequesters hnRNPL via a CA-dinucleotide repeat motif, controlling TJP1 alternative splicing.
- Deletion of the hnRNPL binding motif in mice repressed TJP1 exon 20 usage, favoring the TJP1α- isoform and increasing endothelial permeability.
- Ntras∆CA/∆CA mice exhibited reduced retinal vessel growth, heightened vascular permeability, and myocarditis.
Conclusions:
- NTRAS is an essential regulator of vascular integrity.
- The NTRAS-hnRNPL-TJP1 axis is critical for maintaining endothelial barrier function.
- Dysregulation of NTRAS contributes to vascular pathologies.
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