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Updated: Sep 23, 2025

Application of I TASSER, trRosetta, UCSF Chimera, HADDOCK server, and HEX loria for De Novo and In Silico Design of Proteins
Published on: July 8, 2025
Design and discovery of metamorphic proteins
Acacia F Dishman1, Brian F Volkman2
1Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, USA; Medical Scientist Training Program, Medical College of Wisconsin, Milwaukee, WI, USA.
Metamorphic proteins are unique sequences that switch between multiple structures with distinct functions. Discovering new metamorphic proteins aids disease therapies and designing novel protein-based applications.
Area of Science:
- Biochemistry
- Structural Biology
- Protein Engineering
Background:
- Metamorphic proteins reversibly interconvert between distinct native structures and functions.
- An estimated 4% of Protein Data Bank (PDB) entries may represent metamorphic proteins.
- Common features include marginal thermostability and variable predicted secondary structures.
Purpose of the Study:
- To highlight the significance of metamorphic proteins in biology and medicine.
- To discuss challenges and opportunities in identifying and designing fold-switching proteins.
- To explore the therapeutic and biotechnological potential of metamorphic proteins.
Main Methods:
- Literature review and analysis of existing metamorphic protein data.
- Identification of common biophysical characteristics of metamorphic proteins.
- Exploration of potential applications based on fold-switching capabilities.
Main Results:
- Several metamorphic proteins have been identified since the early 2000s.
- Metamorphic proteins exhibit unique structural plasticity and functional divergence.
- Challenges remain in identifying novel natural metamorphic proteins and designing artificial ones.
Conclusions:
- Identifying new metamorphic proteins can improve targeting of disease-related proteins and enhance protein-based therapies.
- Designed fold-switching proteins offer diverse applications, including biosensors, molecular switches, and self-assembling systems.
- Further research into metamorphic proteins is crucial for advancing medicine and biotechnology.
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