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Updated: Sep 23, 2025

Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
High incidence of PI3K pathway gene mutations in South Indian cervical cancers
Mathew Maria Rose1, Shankar Dhamodharan1, Sundaramoorthy Revathidevi2
1Department of Genetics, Dr. ALM PG Institute of Basic Medical Sciences, University of Madras, Chennai, Tamil Nadu 600113, India.
Introduction:
Cervical cancer is the second most common cancer in India. The phosphatidylinositol-3 kinase (PI3K) signaling is one of the most commonly activated pathways in cancer and comprises key molecules commonly targeted in cancer therapy. This study analyzed six PI3K pathway gene mutations.
Methods:
We carried out targeted next-generation sequencing of six PI3K pathway genes (PIK3CA, PIK3R1, PTEN, AKT1, TSC2, and mTOR) in a total of 93 South Indian cervical cancer samples and confirmed them by sanger sequencing.
Results:
The PI3K pathway gene mutations were observed in 54.8% (51/93) of the tumors and PIK3CA was the most mutated (34.4%, 32/93), followed by TSC2 (18.3%, 17/93), and PIK3R1 (14%, 13/93). The PIK3CA hotspot mutations E542K and E545K observed in this study were likely to disrupt the p110α-p85α interaction that could result in the PI3K pathway activation. We also found a few novel mutations in PIK3R1, PTEN, AKT1, TSC2, and mTOR genes while some of the tumors harbored multiple mutations in the genes of the PI3K pathway. The majority of the tumors were positive for high-risk HPV16/18 (60.7%).
Conclusions:
The high incidence of the PI3K pathway gene mutations observed in this study could be exploited for the therapeutic management of cervical cancers.
Insights
Cervical cancer in India frequently shows mutations in phosphatidylinositol-3 kinase (PI3K) pathway genes. Targeting these PI3K pathway gene mutations offers potential therapeutic strategies for cervical cancer treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Cervical cancer is a significant health concern in India, ranking as the second most common cancer.
- The phosphatidylinositol-3 kinase (PI3K) signaling pathway is frequently activated in various cancers and represents a key target for cancer therapies.
- Understanding genetic alterations in this pathway is crucial for developing effective treatment strategies.
Purpose of the Study:
- To analyze the frequency and spectrum of mutations in six key phosphatidylinositol-3 kinase (PI3K) pathway genes in South Indian cervical cancer patients.
- To identify specific mutations within PI3K pathway genes that could be potential therapeutic targets.
Main Methods:
- Targeted next-generation sequencing was employed to analyze mutations in six PI3K pathway genes: PIK3CA, PIK3R1, PTEN, AKT1, TSC2, and mTOR.
- A cohort of 93 South Indian cervical cancer samples was studied.
- Sanger sequencing was used for confirmation of identified mutations.
Main Results:
- Mutations in the PI3K pathway genes were detected in 54.8% of the cervical tumors.
- PIK3CA mutations were the most prevalent (34.4%), followed by TSC2 (18.3%) and PIK3R1 (14%).
- Novel mutations were identified in PIK3R1, PTEN, AKT1, TSC2, and mTOR, with some tumors exhibiting multiple mutations. High-risk HPV16/18 was present in 60.7% of tumors.
Conclusions:
- The high prevalence of PI3K pathway gene mutations in cervical cancer suggests their potential as therapeutic targets.
- Exploiting these genetic alterations could lead to improved therapeutic management of cervical cancer.
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