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Updated: Sep 23, 2025

Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Crystallographic landscape of SHP2 provides molecular insights for SHP2 targeted drug discovery
Yihui Song1,2, Xinyu Yang1, Shu Wang1
1School of Pharmaceutical Sciences, Zhengzhou University, 450001, Henan, Zhengzhou, China.
Abstract:
The protein tyrosine phosphatase SHP2 encoded by PTPN11 is a promising therapeutic target for cancer therapy. The dynamic change of SHP2 between closed and open conformations under either physiological or pathological conditions provides opportunities to design SHP2 inhibitors for treating SHP2-related diseases. To date, several SHP2 allosteric inhibitors have advanced into clinical trials as mono- or combined therapy of cancers. In this review, we provide an overview on the structural landscape of SHP2 under physiological and pathological conditions and also comprehensively analyze the binding models of SHP2/inhibitor complexes. Structural features of SHP2 under pathological conditions and co-crystal structures of SHP2/inhibitor complexes will definitely facilitate structure-guided design of SHP2 inhibitors. Finally, proteolysis targeting chimeric (PROTAC) based SHP2 degraders have shown therapeutic promise for cancer therapy and are also briefly discussed. We hope this review could provide crystallographic landscape for SHP2 targeted drug discovery.
Insights
Protein tyrosine phosphatase SHP2 (PTPN11) is a key cancer target. This review details SHP2 structures and inhibitor binding, aiding the development of new cancer therapies like PROTACs.
Area of Science:
- Biochemistry
- Structural Biology
- Pharmacology
Background:
- The protein tyrosine phosphatase SHP2, encoded by PTPN11, is a critical target in cancer therapy.
- SHP2's conformational dynamics between closed and open states offer therapeutic intervention points for SHP2-related diseases.
- Several SHP2 allosteric inhibitors are currently in clinical trials for various cancer treatments.
Purpose of the Study:
- To review the structural landscape of SHP2 under physiological and pathological conditions.
- To analyze the binding models of SHP2/inhibitor complexes.
- To provide insights for structure-guided design of novel SHP2 inhibitors and discuss emerging PROTAC technology.
Main Methods:
- Literature review focusing on structural data of SHP2.
- Analysis of co-crystal structures of SHP2/inhibitor complexes.
- Discussion of proteolysis targeting chimeric (PROTAC) based SHP2 degraders.
Main Results:
- Detailed overview of SHP2 structural conformations in different conditions.
- Comprehensive analysis of SHP2-inhibitor binding interactions.
- Highlighting the therapeutic potential of SHP2 inhibitors and PROTACs in cancer.
Conclusions:
- Understanding SHP2's structural features under pathological conditions is crucial for designing effective inhibitors.
- Co-crystal structures provide a foundation for structure-guided drug design targeting SHP2.
- SHP2 targeted therapies, including inhibitors and PROTACs, show significant promise for cancer treatment.
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