Related Experiment Video
Updated: Sep 22, 2025

DNA Nanotubes as a Versatile Tool to Study Semiflexible Polymers
Published on: October 25, 2017
Tube Curvature Slows the Motion of Rod-Coil Block Copolymers through Activated Reptation
Muzhou Wang1, Alexei E Likhtman2, Bradley D Olsen1
1Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.
Abstract:
Understanding the dynamics of molecules with complex shapes is important as researchers develop advanced materials using hybrid molecules. This study applies a slip-spring model to visualize and quantify the entangled dynamics of rod-coil block copolymers. The parameters of the model are determined by matching with molecular dynamics simulation results. By monitoring the positions of polymers along the entanglement tube, rod-coil copolymers are shown to disfavor configurations where the rod occupies curved portions of the tube of randomly varying curvature created by the coil ends. This confirms that reptation of copolymers occurs by an activated mechanism and is the first demonstration of the activation barriers that have been previously inferred through diffusion measurements by simulation and experiment. The barriers to diffusion are further quantified by considering the curvilinear motion of ring polymers, and their effect on diffusion is quantitatively captured by considering one-dimensional motion along an entanglement tube with a rough free energy potential.
Related Concept Videos
Mechanism of Ciliary Motion
The cilia are made up of microtubules in a 9+2 arrangement, with nine microtubule doublet ring bundles, surrounding a pair of central singlet microtubule bundles. The doublet microtubule bundles are...
Actin Filament Depolymerization
In F-actin, the ADF/cofilin proteins...
Mechanism of Lamellipodia Formation
Actin Treadmilling
Mechanism of Filopodia Formation
Their main function is to guide migrating cells during normal tissue morphogenesis or cancer metastasis by recognizing and making initial contacts with the extracellular matrix. However, they can also act as stationary cell anchors or help to establish communication...
Actin Polymerization and Cell Motility
Actin cytoskeleton dynamics can produce pushing, pulling, and resistance forces that help the cell to migrate....

