Related Experiment Video
Updated: Sep 22, 2025

Three and Four-Dimensional Visualization and Analysis Approaches to Study Vertebrate Axial Elongation and Segmentation
Published on: February 28, 2021
A deep learning framework for vertebral morphometry and Cobb angle measurement with external validation
Danis Alukaev1, Semen Kiselev1, Tamerlan Mustafaev1,2
1AI Lab, Innopolis University, Universitetskaya St 1, 420500, Innopolis, Republic of Tatarstan, Russian Federation.
Purpose:
To propose a fully automated deep learning (DL) framework for the vertebral morphometry and Cobb angle measurement from three-dimensional (3D) computed tomography (CT) images of the spine, and validate the proposed framework on an external database.
Methods:
The vertebrae were first localized and segmented in each 3D CT image using a DL architecture based on an ensemble of U-Nets, and then automated vertebral morphometry in the form of vertebral body (VB) and intervertebral disk (IVD) heights, and spinal curvature measurements in the form of coronal and sagittal Cobb angles (thoracic kyphosis and lumbar lordosis) were performed using dedicated machine learning techniques. The framework was trained on 1725 vertebrae from 160 CT images and validated on an external database of 157 vertebrae from 15 CT images.
Results:
The resulting mean absolute errors (± standard deviation) between the obtained DL and corresponding manual measurements were 1.17 ± 0.40 mm for VB heights, 0.54 ± 0.21 mm for IVD heights, and 3.42 ± 1.36° for coronal and sagittal Cobb angles, with respective maximal absolute errors of 2.51 mm, 1.64 mm, and 5.52°. Linear regression revealed excellent agreement, with Pearson's correlation coefficient of 0.943, 0.928, and 0.996, respectively.
Conclusion:
The obtained results are within the range of values, obtained by existing DL approaches without external validation. The results therefore confirm the scalability of the proposed DL framework from the perspective of application to external data, and time and computational resource consumption required for framework training.
Related Concept Videos
Vertebral Column: Regions and Curvature
Regions of the Vertebral Column
In an adult, the spine is subdivided into five regions: the cervical, the thoracic, the lumbar, the sacral, and the coccygeal region. The spine initially develops as a series of 33 vertebrae; after 20 years of age, the nine bones in the sacral region, five sacral, and four coccygeal bones fuse to form...
General Structure of a Vertebra
Spinal Cord: Cross-sectional Anatomy
Gray Matter and its Components
Central to the gray matter is...
Classification of Bones
Long and Short Bones
The appendicular skeleton, particularly the upper and lower limbs, is primarily made of long and short bones. The...

