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A Chromatin Immunoprecipitation Assay to Identify Novel NFAT2 Target Genes in Chronic Lymphocytic Leukemia
Published on: December 4, 2018
NCOA2 coordinates with the transcriptional KAT2B-NF-κB partner to trigger inflammation response in acute kidney
Ping Zhou1, Dongdong Li2, Fuli Luo3
1Department of Nephrology, Jiangxi Provincial People's Hospital Affiliated to Nanchang University, Nanchang 330006, Jiangxi, China.
Abstract:
Dysregulation of multiple genes is an important risk factor for acute kidney injury (AKI). Numerous genes, such as proinflammatory cytokines, intracellular cell adhesion molecules (ICAMs), and nitric oxide synthases (NOSs), are implicated in AKI pathogenesis. However, the molecular mechanisms involved in the dysregulation of these genes are still obscure. Herein, we discovered that two subunits of NF-κB (p50 and p65) couple with lysine acetyltransferase 2B (KAT2B) and nuclear receptor coactivator 2 (NOCA2) to assemble a transcriptional complex in a LPS-induced mouse model of AKI. The NCOA2-KAT2B-NF-κB complex bound to the promoters of some NF-κB target genes, such as interleukin 1 beta (IL-1B), IL-6, tumor necrosis factor alpha (TNFA), ICAM1, vascular cell adhesion molecule 1 (VCAM1), cluster of differentiation 38 (CD38), CD40, CD80, and NOS2, and transactivated their expression. In vitro knockdown of components of the NCOA2-KAT2B-NF-κB complex or blockage of KAT2B by its inhibitors (5-chloro-2-(4-nitrophenyl)-3(2H)-isothiazolone [CNIT] and garcinol) significantly decreased the expression of these NF-κB target genes following LPS treatment. The administration of CNIT and garcinol significantly improved the in vivo outcomes of the AKI mice. Our findings reveal the underlying mechanism of NF-κB target upregulation in the pathogenesis of LPS-induced AKI and identify a new therapeutic strategy for AKI that involves targeting the NCOA2-KAT2B-NF-κB complex.
Insights
Researchers discovered a new transcriptional complex involving NF-κB, KAT2B, and NCOA2 that drives acute kidney injury (AKI). Inhibiting this complex with compounds like CNIT and garcinol improved AKI outcomes in mice.
Area of Science:
- Molecular Biology
- Immunology
- Nephrology
Background:
- Acute kidney injury (AKI) involves complex gene dysregulation.
- Key genes in AKI pathogenesis include proinflammatory cytokines, ICAMs, and NOSs.
- The precise molecular mechanisms driving this gene dysregulation remain unclear.
Purpose of the Study:
- To elucidate the molecular mechanisms behind NF-κB target gene dysregulation in LPS-induced AKI.
- To identify a novel transcriptional complex involved in AKI pathogenesis.
- To explore potential therapeutic targets for AKI.
Main Methods:
- Utilized a lipopolysaccharide (LPS)-induced mouse model of AKI.
- Investigated the interaction of NF-κB subunits (p50, p65) with KAT2B and NCOA2.
- Assessed the binding of the NCOA2-KAT2B-NF-κB complex to target gene promoters.
- Performed in vitro knockdown experiments and utilized KAT2B inhibitors (CNIT, garcinol).
- Evaluated the therapeutic efficacy of inhibitors in vivo.
Main Results:
- Identified a transcriptional complex composed of NCOA2, KAT2B, and NF-κB (p50/p65).
- This complex directly binds to and activates promoters of key AKI-associated genes (IL-1B, IL-6, TNFA, ICAM1, VCAM1, CD38, CD40, CD80, NOS2).
- In vitro knockdown and inhibition of KAT2B significantly reduced target gene expression post-LPS.
- Administration of CNIT and garcinol ameliorated AKI in vivo.
Conclusions:
- The NCOA2-KAT2B-NF-κB complex is a critical mediator of NF-κB target gene upregulation in LPS-induced AKI.
- Targeting this complex presents a promising therapeutic strategy for AKI.
- KAT2B inhibitors demonstrate potential for treating AKI.
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