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Protein Complex Assembly02:41

Protein Complex Assembly

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Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
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Protein Complexes with Interchangeable Parts01:57

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Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
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Around 4 billion years ago, oceans began to condense on earth while volcanic eruptions released nitrogen, carbon dioxide, methane, ammonia, and hydrogen into the primordial atmosphere. However, organisms with the characteristics of life were not initially present on earth. Scientists have used experimentation to determine how organisms evolved that could grow, reproduce, and maintain an internal environment.
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The Supercomplexes in the Crista Membrane01:41

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The mitochondrial cristae membrane is the primary site for the oxidative phosphorylation (OXPHOS) process of energy conversion mediated through respiratory complexes I to V. These complexes have been widely studied for decades, and it has been proven that they form supramolecular structures called respiratory supercomplexes (SC). These higher-order complexes may be crucial in maintaining the biochemical structure and improving the physiological activity of the individual complexes while...
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Compounds Essential to Human Function01:25

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The human body is composed of cells that are fundamentally made up of several different molecules. These molecules are essential to carry out all physiological processes in the body and are broadly classified into organic and inorganic based on their chemical structures.
Inorganic Compounds Essential to Human Functioning
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Mechanisms of Membrane Domain Formation00:59

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Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
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Related Experiment Video

Updated: Sep 22, 2025

The MultiBac Protein Complex Production Platform at the EMBL
13:51

The MultiBac Protein Complex Production Platform at the EMBL

Published on: July 11, 2013

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The simple emergence of complex molecular function.

Susanna Manrubia1,2

  • 1Grupo Interdisciplinar de Sistemas Complejos (GISC), Madrid, Spain.

Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences
|May 23, 2022
PubMed
Summary
This summary is machine-generated.

New molecular functions can arise easily, challenging traditional evolution views. Mechanisms like modularity and environmental niches facilitate this emergence, with natural selection refining new phenotypes.

Keywords:
genotype–phenotype mapmodularitymolecular cooperationredundancyviral evolutionviroids

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Area of Science:

  • Molecular Biology
  • Evolutionary Biology
  • Systems Chemistry

Background:

  • Traditional molecular evolution models emphasize descent with modification of functional sequences.
  • Emergence of new functions *de novo* is increasingly recognized as a significant evolutionary pathway.
  • Early molecular evolution likely involved random polymers and proto-functional molecules within cellular environments.

Purpose of the Study:

  • To challenge the traditional view of molecular evolution.
  • To explore the mechanisms facilitating the *de novo* emergence of new molecular functions.
  • To highlight the role of molecular ecology and natural selection in shaping complexity.

Main Methods:

  • Conceptual analysis of molecular evolution mechanisms.
  • Review of intrinsic factors promoting functional emergence (e.g., sequence-structure redundancy, plasticity, modularity, cooperation).
  • Consideration of ecological filtering by molecular niches.

Main Results:

  • New molecular functions can emerge readily, not solely through modification of existing ones.
  • Intrinsic properties of molecular organization facilitate functional innovation.
  • Environmental niches and combinatorial exploration of variants are key filters and drivers.

Conclusions:

  • The emergence of molecular function is a dynamic process facilitated by multiple intrinsic and extrinsic factors.
  • Combinatorial exploration and natural selection act upon available molecular variants to generate complexity.
  • This perspective offers a broader understanding of life's origins and evolutionary trajectories.