Association of APOE-Independent Alzheimer Disease Polygenic Risk Score With Brain Amyloid Deposition in Asymptomatic
Laura Xicota1, Beata Gyorgy1, Benjamin Grenier-Boley1
1From the ICM Paris Brain Institute (L.X., B.G., A.L., G.«F., F.D., J.S.G., O.C., N.V., B.D., M.-C.P.), CNRS UMR7225, INSERM U1127, Sorbonne University, Hôpital de la Pitié-Salpêtrière; Univ. Lille (B.G.-B., P.A., J.-C.L.), Inserm, CHU Lille, Institut Pasteur de Lille, U1167-RID-AGE-Facteurs de risque et déterminants moléculaires des maladies liées au vieillissement; Inria (J.S.G., O.C.), Aramis-Project Team, Paris; Centre d'Acquisition et Traitement des Images (CATI platform) (G.M., M.-O.H.), cati-neuroimaging.com, Paris; Centre des Maladies Cognitives et Comportementales (M.L., M.-O.H., B.D.), IM2A, AP-HP, Sorbonne Université, Hôpital de la Salpêtrière; Department of Neurology (N.V., B.D.), Hôpital Pitié-Salpêtrière, AP-HP Sorbonne Université; Sorbonne Université (M.-O.H.), CNRS, INSERM, Laboratoire d'Imagerie Biomédicale, LIB; and AP-HP (M.-O.H.), Hôpital Pitié-Salpêtrière, Médecine Nucléaire, Paris, France.
Background And Objectives:
Brain amyloid deposition, a major risk factor for Alzheimer disease (AD), is currently estimated by measuring CSF or plasma amyloid peptide levels or by PET imaging. Assessing genetic risks relating to amyloid deposition before any accumulation has occurred would allow for earlier intervention in persons at increased risk for developing AD. Previous work linking amyloid burden and genetic risk relied almost exclusively on APOE, a major AD genetic risk factor. Here, we ask whether a polygenic risk score (PRS) that incorporates an optimized list of common variants linked to AD and excludes APOE is associated with brain amyloid load in cognitively unimpaired older adults.
Methods:
We included 291 asymptomatic older participants from the INveStIGation of AlzHeimer's PredicTors (INSIGHT pre-AD) cohort who underwent amyloid imaging, including 83 amyloid-positive (+) participants. We used an Alzheimer's (A) PRS composed of 33 AD risk variants excluding APOE and selected the 17 variants that showed the strongest association with amyloid positivity to define an optimized (oA) PRS. Participants from the Alzheimer's Disease Neuroimaging Initiative (ADNI) study (228 participants, 90 amyloid [+]) were tested as a validation cohort. Finally, 2,300 patients with AD and 6,994 controls from the European Alzheimer's Disease Initiative (EADI) were evaluated.
Results:
A-PRS was not significantly associated with amyloid burden in the INSIGHT or ADNI cohorts with or without correction for the APOE genotype. However, oA-PRS was significantly associated with amyloid status independently of APOE adjustment (INSIGHT odds ratio [OR]: 5.26 [1.71-16.88]; ADNI OR: 3.38 [1.02-11.63]). Of interest, oA-PRS accurately discriminated amyloid (+) and (-) APOE ε4 carriers (INSIGHT OR: 181.6 [7.53-10,674.6]; ADNI OR: 44.94 [3.03-1,277]). A-PRS and oA-PRS showed a significant association with disease status in the EADI cohort (OR: 1.68 [1.53-1.85] and 2.06 [1.73-2.45], respectively). Genes assigned to oA-PRS variants were enriched in ontologies related to β-amyloid metabolism and deposition.
Discussion:
PRSs relying on AD genetic risk factors excluding APOE may improve risk prediction for brain amyloid, allowing stratification of cognitively unimpaired individuals at risk of AD independent of their APOE status.
