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Updated: Sep 21, 2025

Proton Transfer and Protein Conformation Dynamics in Photosensitive Proteins by Time-resolved Step-scan Fourier-transform Infrared Spectroscopy
Published on: June 27, 2014
Light-induced protein structural dynamics in bacteriophytochrome revealed by time-resolved x-ray solution scattering.
Sang Jin Lee1,2, Tae Wu Kim3, Jong Goo Kim1,2
1Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Bacteriophytochromes (BphPs) undergo light-induced structural changes. This study reveals Pfr-to-Pr photoconversion dynamics in solution, uncovering key intermediate states and signaling mechanisms.
Area of Science:
- Biochemistry and Molecular Biology
- Structural Biology
- Photobiology
Background:
- Bacteriophytochromes (BphPs) are red/far-red light photoreceptors controlling diverse biological processes.
- The Pfr-to-Pr photoconversion mechanism in solution remains poorly understood.
- Understanding these dynamics is crucial for deciphering signal transduction in BphPs.
Purpose of the Study:
- To elucidate the structural dynamics of Pfr-to-Pr photoconversion in Bacteriophytochromes.
- To identify intermediate structural states during light-induced transitions.
- To provide mechanistic insights into long-range signal transmission in modular signaling proteins.
Main Methods:
- Time-resolved X-ray solution scattering (TRXSS) was employed to capture light-induced structural changes.
- Kinetic analysis of TRXSS data identified distinct structural species and their interconversion time constants.
- Molecular dynamics simulations were used to analyze quaternary structural rearrangements.
Main Results:
- Three distinct structural species (lumi-F, meta-F, and Pr) were identified during Pfr-to-Pr photoconversion.
- Interconversion occurred with time constants of 95 μs and 21 ms.
- Light activation induced quaternary structural rearrangements from a closed Pfr state to an open Pr state.
Conclusions:
- This study provides the first mechanistic insights into Pfr-to-Pr photoconversion dynamics in solution.
- Revealed structural transitions highlight the role of quaternary rearrangements in signal propagation.
- Findings advance understanding of how Bacteriophytochromes function as modular signaling proteins.
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