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MicroRNA In situ Hybridization for Formalin Fixed Kidney Tissues
Published on: November 30, 2013
miRNA Pattern in Hypoxic Microenvironment of Kidney Cancer-Role of PTEN
Aleksandra Majewska1,2, Klaudia Brodaczewska1, Aleksandra Filipiak-Duliban1,2
1Laboratory of Molecular Oncology and Innovative Therapies, Military Institute of Medicine, 128 Szaserow Street, 04-141 Warsaw, Poland.
Abstract:
MicroRNAs are post-transcriptional regulators of gene expression, and disturbances of their expression are the basis of many pathological states, including cancers. The miRNA pattern in the context of tumor microenvironment explains mechanisms related to cancer progression and provides a potential target of modern therapies. Here we show the miRNA pattern in renal cancer focusing on hypoxia as a characteristic feature of the tumor microenvironment and dysregulation of PTEN, being a major tumor suppressor. Methods comprised the CRSPR/Cas9 mediated PTEN knockout in the Renca kidney cancer cell line and global miRNA expression analysis in both in vivo and in vitro (in normoxic and hypoxic conditions). The results were validated on human cancer models with distinct PTEN status. The increase in miR-210-3p in hypoxia was universal; however, the hypoxia-induced decrease in PTEN was associated with an increase in miR-221-3p, the loss of PTEN affected the response to hypoxia differently by decreasing miR-10b-5p and increasing miR-206-3p. In turn, the complete loss of PTEN induces miR-155-5p, miR-100-5p. Upregulation of miR-342-3p in knockout PTEN occurred in the context of the whole tumor microenvironment. Thus, effective identification of miRNA patterns in cancers must consider the specificity of the tumor microenvironment together with the mutations of key suppressors.
Insights
MicroRNA patterns in renal cancer reveal how hypoxia and PTEN loss impact gene expression. Understanding these changes is crucial for developing targeted cancer therapies.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) are key regulators of gene expression, and their dysregulation is implicated in various pathologies, including cancer.
- The tumor microenvironment, characterized by features like hypoxia, significantly influences cancer progression and therapeutic responses.
- PTEN (Phosphatase and Tensin homolog) is a critical tumor suppressor whose alterations are common in cancers.
Purpose of the Study:
- To investigate the miRNA expression patterns in renal cancer.
- To elucidate the interplay between hypoxia, PTEN status, and miRNA dysregulation within the tumor microenvironment.
- To identify potential miRNA-based therapeutic targets for renal cancer.
Main Methods:
- Utilized CRISPR/Cas9 to create a PTEN knockout in the Renca kidney cancer cell line.
- Performed global miRNA expression analysis in vitro (normoxic and hypoxic conditions) and in vivo.
- Validated findings on human renal cancer models with varying PTEN status.
Main Results:
- Hypoxia universally increased miR-210-3p expression.
- Hypoxia-induced PTEN decrease correlated with increased miR-221-3p.
- PTEN loss altered hypoxia-driven miRNA changes, decreasing miR-10b-5p and increasing miR-206-3p.
- Complete PTEN loss induced miR-155-5p and miR-100-5p.
- Upregulation of miR-342-3p was observed in PTEN-knockout tumors within the tumor microenvironment.
Conclusions:
- MiRNA patterns in renal cancer are significantly influenced by both hypoxia and PTEN mutation status.
- Effective cancer therapy strategies must consider the tumor microenvironment's specific characteristics and genetic alterations.
- Specific miRNAs (e.g., miR-210-3p, miR-221-3p, miR-10b-5p, miR-206-3p, miR-155-5p, miR-100-5p, miR-342-3p) are potential biomarkers and therapeutic targets in renal cancer.
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