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Frequent 4EBP1 Amplification Induces Synthetic Dependence on FGFR Signaling in Cancer
Prathibha Mohan1, Joyce Pasion1, Giovanni Ciriello2
1Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Abstract:
The eIF4E translation initiation factor has oncogenic properties and concordantly, the inhibitory eIF4E-binding protein (4EBP1) is considered a tumor suppressor. The exact molecular effects of 4EBP1 activation in cancer are still unknown. Surprisingly, 4EBP1 is a target of genomic copy number gains (Chr. 8p11) in breast and lung cancer. We noticed that 4EBP1 gains are genetically linked to gains in neighboring genes, including WHSC1L1 and FGFR1. Our results show that FGFR1 gains act to attenuate the function of 4EBP1 via PI3K-mediated phosphorylation at Thr37/46, Ser65, and Thr70 sites. This implies that not 4EBP1 but instead FGFR1 is the genetic target of Chr. 8p11 gains in breast and lung cancer. Accordingly, these tumors show increased sensitivity to FGFR1 and PI3K inhibition, and this is a therapeutic vulnerability through restoring the tumor-suppressive function of 4EBP1. Ribosome profiling reveals genes involved in insulin signaling, glucose metabolism, and the inositol pathway to be the relevant translational targets of 4EBP1. These mRNAs are among the top 200 translation targets and are highly enriched for structure and sequence motifs in their 5'UTR, which depends on the 4EBP1-EIF4E activity. In summary, we identified the translational targets of 4EBP1-EIF4E that facilitate the tumor suppressor function of 4EBP1 in cancer.
Insights
Genomic gains in breast and lung cancer target FGFR1, not 4EBP1, attenuating 4EBP1
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- The translation initiation factor eIF4E is oncogenic, while its inhibitor, 4EBP1, acts as a tumor suppressor.
- The precise molecular mechanisms of 4EBP1 in cancer remain unclear.
- Genomic copy number gains at Chr. 8p11, including 4EBP1, are observed in breast and lung cancers.
Purpose of the Study:
- To elucidate the molecular effects of 4EBP1 activation in cancer.
- To investigate the genetic targets of Chr. 8p11 gains and their impact on 4EBP1 function.
- To identify therapeutic vulnerabilities associated with these genetic alterations.
Main Methods:
- Analysis of genomic copy number gains linked to 4EBP1.
- Investigating the interaction between FGFR1 gains and 4EBP1 phosphorylation.
- Utilizing ribosome profiling to identify 4EBP1 translational targets.
Main Results:
- FGFR1 gains attenuate 4EBP1 function through PI3K-mediated phosphorylation.
- FGFR1, not 4EBP1, is identified as the primary genetic target of Chr. 8p11 gains.
- Tumors with these gains exhibit sensitivity to FGFR1 and PI3K inhibition.
- Ribosome profiling identified key translational targets of 4EBP1, including genes in insulin signaling and metabolism.
Conclusions:
- Chr. 8p11 gains in breast and lung cancer primarily target FGFR1, leading to suppressed 4EBP1 tumor-suppressive activity.
- Restoring 4EBP1 function via FGFR1 and PI3K inhibition presents a therapeutic strategy.
- Understanding 4EBP1's translational targets provides insights into its tumor suppressor role in cancer.
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