SMER28 Attenuates PI3K/mTOR Signaling by Direct Inhibition of PI3K p110 Delta
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Updated: Sep 21, 2025

Mechanism of Kemeng Fang's Inhibition of Podocyte Apoptosis in Rats with Membranous Nephropathy through the PI3K/AKT Signaling Pathway
Published on: August 23, 2024
Marco Kirchenwitz1,2, Stephanie Stahnke1, Silvia Prettin1
1Department of Cell Biology, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Abstract:
SMER28 (Small molecule enhancer of Rapamycin 28) is an autophagy-inducing compound functioning by a hitherto unknown mechanism. Here, we confirm its autophagy-inducing effect by assessing classical autophagy-related parameters. Interestingly, we also discovered several additional effects of SMER28, including growth retardation and reduced G1 to S phase progression. Most strikingly, SMER28 treatment led to a complete arrest of receptor tyrosine kinase signaling, and, consequently, growth factor-induced cell scattering and dorsal ruffle formation. This coincided with a dramatic reduction in phosphorylation patterns of PI3K downstream effectors. Consistently, SMER28 directly inhibited PI3Kδ and to a lesser extent p110γ. The biological relevance of our observations was underscored by SMER28 interfering with InlB-mediated host cell entry of Listeria monocytogenes, which requires signaling through the prominent receptor tyrosine kinase c-Met. This effect was signaling-specific, since entry of unrelated, gram-negative Salmonella Typhimurium was not inhibited. Lastly, in B cell lymphoma cells, which predominantly depend on tonic signaling through PI3Kδ, apoptosis upon SMER28 treatment is profound in comparison to non-hematopoietic cells. This indicates SMER28 as a possible drug candidate for the treatment of diseases that derive from aberrant PI3Kδ activity.
Insights
Small molecule enhancer of Rapamycin 28 (SMER28) induces autophagy and inhibits receptor tyrosine kinase signaling by targeting PI3Kδ. This compound shows potential as a therapeutic for PI3Kδ-driven cancers.
Area of Science:
- Cell Biology
- Molecular Pharmacology
- Cancer Biology
Background:
- SMER28 is an autophagy-inducing compound with an unknown mechanism of action.
- Autophagy plays a role in cellular homeostasis and disease.
- Receptor tyrosine kinase (RTK) signaling is crucial for cell growth and survival.
Purpose of the Study:
- To elucidate the mechanism of SMER28's autophagy induction.
- To identify additional cellular effects of SMER28.
- To evaluate SMER28 as a potential therapeutic agent.
Main Methods:
- Assessment of autophagy-related parameters.
- Cell cycle analysis.
- Analysis of receptor tyrosine kinase signaling pathways.
- Inhibition assays using PI3Kδ and p110γ.
- Bacterial invasion assays using *Listeria monocytogenes* and *Salmonella* Typhimurium.
- Apoptosis assays in B cell lymphoma and non-hematopoietic cells.
Main Results:
- SMER28 confirmed to induce autophagy and cause growth retardation.
- SMER28 completely arrested RTK signaling, inhibiting cell scattering and dorsal ruffles.
- SMER28 directly inhibited PI3Kδ and p110γ, reducing PI3K downstream signaling.
- SMER28 blocked *Listeria monocytogenes* entry, dependent on c-Met signaling, but not *Salmonella* Typhimurium entry.
- SMER28 induced profound apoptosis in PI3Kδ-dependent B cell lymphoma cells.
Conclusions:
- SMER28 functions by inhibiting PI3Kδ, leading to autophagy induction and RTK signaling arrest.
- SMER28 exhibits anti-cancer potential, particularly in B cell malignancies dependent on PI3Kδ.
- SMER28 is a promising drug candidate for diseases driven by aberrant PI3Kδ activity.
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