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HTSDSF Explorer, A Novel Tool to Analyze High-throughput DSF Screenings
Pau Martin-Malpartida1, Emil Hausvik2, Jarl Underhaug3
1Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, Barcelona 08028, Spain.
Journal of Molecular Biology
|June 6, 2022
Summary
We developed HTSDSF explorer, a user-friendly application for analyzing differential scanning fluorimetry (DSF) data. This tool simplifies the identification of drug candidates by rapidly analyzing compound libraries for novel therapeutic targets.
Area of Science:
- Biophysics
- Drug Discovery
- Computational Chemistry
Background:
- High-throughput screening (HTS) is crucial for identifying new drug candidates.
- Analyzing differential scanning fluorimetry (DSF) data for target-based assays is often manual and time-consuming.
- Current methods require combining multiple software packages for analyzing melting temperature (Tm) and ligand-induced shifts (ΔTm).
Purpose of the Study:
- To develop a user-friendly, all-in-one application to simplify DSF data analysis.
- To expedite the identification and validation of primary hits in drug discovery.
- To facilitate the determination of preliminary binding constants (KD) for validated hits.
Main Methods:
- Developed HTSDSF explorer, a server-client application suite.
- Implemented interactive pre-analysis and display of Tm and ΔTm.
- Integrated dose-response assay analysis for KD determination.
Main Results:
- HTSDSF explorer significantly reduces analysis time for primary screenings.
- The application allows rapid interactive study of hundreds of conditions.
- Enables efficient selection of primary hits and ranking of validated hits.
Conclusions:
- HTSDSF explorer streamlines the drug discovery process by simplifying complex biophysical data analysis.
- The application accelerates the identification and validation of potential drug candidates.
- Facilitates faster advancement of drug discovery efforts through efficient hit selection and ranking.
Keywords:
automatic K(D) analysisautomatic T(m)differential scanning fluorimetryhigh-throughput compound screeningthermal shift assay
