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Updated: Sep 20, 2025

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
DNA Damage Response and Repair in Adaptive Immunity
Sha Luo1,2, Ruolin Qiao1,2, Xuefei Zhang1
1Biomedical Pioneering Innovation Center, Innovation Center for Genomics, Peking University, Beijing, China.
Antibody diversification relies on DNA repair mechanisms for V(D)J recombination and class switch recombination (CSR). Proper repair of DNA damage response (DDR) factors is crucial for adaptive immunity and preventing genomic instability.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- Antibody diversification is essential for adaptive immunity against pathogens.
- Key processes include V(D)J recombination, class switch recombination (CSR), and somatic hypermutation (SHM), initiated by recombination-activating gene (RAG) and activation-induced cytidine deaminase (AID).
- Proper DNA repair is critical for antibody diversification and preventing genomic instability.
Purpose of the Study:
- To discuss the mechanisms of DNA damage repair in antibody diversification.
- To highlight the roles of DNA damage response (DDR) and end-joining factors.
- To explore the proposed role of cohesin-mediated loop extrusion in V(D)J recombination and CSR.
Main Methods:
- Review of DNA damage response (DDR) pathways.
- Analysis of V(D)J recombination and class switch recombination (CSR) mechanisms.
- Discussion of cohesin-mediated loop extrusion in the context of DNA repair.
Main Results:
- DNA damage repair factors and double-strand break (DSB) end-joining factors are recruited to RAG- and AID-initiated lesions.
- These factors coordinate the resolution of DNA lesions and DSBs for productive recombination.
- Cohesin-mediated loop extrusion is proposed as a mechanism underlying V(D)J recombination and CSR.
Conclusions:
- Effective DNA repair is indispensable for antibody diversification and maintaining genomic integrity.
- Understanding these repair mechanisms is crucial for comprehending adaptive immunity and related diseases.
- Cohesin's role in loop extrusion offers new insights into the mechanics of V(D)J recombination and CSR.
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