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Related Experiment Video
Updated: Apr 8, 2026

Measuring Cell Cycle Progression Kinetics with Metabolic Labeling and Flow Cytometry
Published on: May 22, 2012
Core control principles of the eukaryotic cell cycle.
Souradeep Basu1,2, Jessica Greenwood3, Andrew W Jones3
1Cell Cycle Laboratory, The Francis Crick Institute, London, UK. souradeepb@deepmind.com.
Cyclin-dependent kinases (CDKs) control cell division. This study shows that increasing CDK activity, not just substrate specificity, drives cell cycle events, reconciling two major CDK models.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Cyclin-dependent kinases (CDKs) regulate the eukaryotic cell cycle, with distinct cyclin-CDK complexes initiating DNA replication (S-CDK) and mitosis (M-CDK).
- The precise mechanisms by which these complexes organize cell cycle progression remain debated, with two prominent models: functional specialization versus redundant CDK activity.
- One model emphasizes distinct substrate specificities for S-CDKs and M-CDKs, while the other posits that overall CDK activity levels, rather than specificity, dictate cell cycle order.
Purpose of the Study:
- To reconcile the opposing models of cell cycle control by investigating the functional specialization and substrate specificities of S-CDKs and M-CDKs.
- To determine whether CDK substrate specificity or overall CDK activity is the primary determinant of cell cycle event ordering.
- To elucidate the interplay between CDK activity levels and substrate specificity in driving key cell cycle transitions.
Main Methods:
- Utilized phosphoproteomic assays to measure in vivo CDK activity in fission yeast.
- Compared the substrate specificities of S-CDK and M-CDK complexes.
- Investigated the effect of altering CDK activity on the ability of S-CDK to perform M-CDK functions, including the role of protein phosphatase 1.
Main Results:
- Found that S-CDK and M-CDK exhibit remarkably similar substrate specificities, challenging the notion of complete functional specialization.
- Demonstrated that S-CDK can drive mitosis when protein phosphatase 1 is removed from the centrosome, indicating that increased S-CDK activity can overcome specificity differences.
- Showed that elevated S-CDK activity in vivo is sufficient to execute M-CDK functions, supporting the role of quantitative activity increases.
Conclusions:
- The core cell cycle engine relies primarily on a quantitative increase in CDK activity throughout the cell cycle.
- Minor, surmountable qualitative differences in catalytic specialization exist between S-CDKs and M-CDKs.
- This study unifies the functional specialization and redundant activity models, highlighting the importance of both quantitative activity and substrate specificity in cell cycle control.

