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Related Concept Videos

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Metabolism of Chemolithotrophs

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Chemolithotrophs are microorganisms that obtain energy by oxidizing inorganic molecules such as hydrogen gas (H₂), ammonia (NH₃), reduced sulfur compounds (H₂S, S²⁻), and ferrous iron (Fe²⁺). Unlike heterotrophic organisms that rely on organic carbon, chemolithotrophs transfer electrons from these inorganic donors to the electron transport chain (ETC), generating a proton motive force (PMF) that drives ATP synthesis through oxidative phosphorylation.
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Carbon dioxide fixation in prokaryotes enables the assimilation of inorganic carbon into organic molecules, supporting biosynthetic pathways, sustaining ecosystems, and contributing to the global carbon cycle. It also has industrial applications in carbon capture and bioproduct synthesis. Autotrophic organisms rely on this process to utilize CO₂ as a carbon source in diverse environments.The Calvin CycleThe Calvin cycle is the most widespread carbon fixation mechanism, primarily used by...
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Fermentation is a crucial anaerobic metabolic process that enables microbes to derive energy from sugar without relying on oxygen or an electron transport chain. This process is fundamental to various biological and industrial applications and is classified based on the metabolic products generated.Role of Pyruvate in FermentationPyruvate and its derivatives serve as key electron acceptors in fermentative pathways. The oxidation of NADH to regenerate NAD+ is essential for the continuation of...
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Anoxygenic phototrophic bacteria are a diverse group of microorganisms that perform photosynthesis without producing oxygen. They primarily include purple sulfur bacteria, purple nonsulfur bacteria, green sulfur bacteria, and green nonsulfur bacteria. These bacteria are classified into the Gammaproteobacteria, Alphaproteobacteria, Betaproteobacteria, Chlorobi, and Chloroflexi lineages, each with distinct physiological and ecological adaptations.Purple sulfur bacteria belong to the...
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Modeling a propionate-oxidizing syntrophic coculture using thermodynamic principles.

Alexandre Leurent1, Roman Moscoviz1

  • 1SUEZ, CIRSEE, Le Pecq, France.

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|June 9, 2022
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Biokinetic models for microbial cocultures were evaluated. Models incorporating thermodynamic-based functions and dynamic growth yields improved accuracy and consistency, aligning with thermodynamic laws.

Keywords:
ADM1H2 inhibitionanaerobic digestionbioenergetics modelingmicrobial growth yieldsmodel predictivityoverfitting

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Area of Science:

  • Microbial Ecology
  • Biochemical Engineering
  • Thermodynamics

Background:

  • Cocultures of Syntrophobacter fumaroxidans and Methanospirillum hungatei are crucial in anaerobic digestion.
  • Accurate biokinetic modeling is essential for understanding and optimizing these processes.
  • Existing models often struggle with thermodynamic consistency and parameter repeatability.

Purpose of the Study:

  • To compare four biokinetic models for a S. fumaroxidans and M. hungatei coculture.
  • To evaluate the impact of different growth yield and hydrogen inhibition functions.
  • To identify models that adhere to thermodynamic principles and provide repeatable parameters.

Main Methods:

  • Developed and compared four biokinetic models differing in growth yield (dynamic/constant) and hydrogen inhibition (noncompetitive/thermodynamic).
  • Trained models using batch experimental data and analyzed fitted parameters.
  • Validated model predictive power using chemostat experimental data.
  • Assessed thermodynamic consistency by calculating Gibbs free energy changes.

Main Results:

  • All four models accurately fitted the training data.
  • ADM1-like models yielded parameters inconsistent with literature and violated the second law of thermodynamics on test data.
  • Models with thermodynamic-based inhibition and dynamic growth yields produced consistent, repeatable parameters aligned with literature and thermodynamic laws.

Conclusions:

  • Implementing thermodynamic-based functions in biokinetic models enhances predictive accuracy and reliability.
  • Dynamic computation of growth yields is crucial for robust model parameterization.
  • Thermodynamic constraints are vital for developing scientifically sound biokinetic models of microbial ecosystems.