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Detection of Bacteria Using Fluorogenic DNAzymes
Published on: May 28, 2012
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Sensitive and Selective Detection of Enterococcus faecalis Using a New Turn-on Fluorogenic β-glucosidase Substrate
Xianhu Wei1, Qihui Gu1, Ying Feng1
1Guangdong Provincial Key Laboratory of Microbial Safety and Health, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China.
Photochemistry and Photobiology
|June 14, 2022
Summary
A new fluorogenic substrate, CFMU-Glu, enables sensitive detection of β-glucosidase activity and Enterococcus faecalis (E. faecalis). A specialized broth (PBF-B) enhances detection selectivity and signal intensity for E. faecalis in various samples.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Microbiology
Background:
- Developing sensitive and selective probes for enzyme activity and bacterial detection is crucial in diagnostics.
- Existing methods may lack the sensitivity or specificity required for early-stage detection of specific bacteria like Enterococcus faecalis.
- 7-hydroxycoumarin derivatives offer potential as fluorescent probes due to their optical properties.
Purpose of the Study:
- To develop a novel, simple-to-synthesize, turn-on fluorogenic substrate (CFMU-Glu) for β-glucosidase activity.
- To create a sensitive and selective fluorogenic broth (PBF-B) for the detection of Enterococcus faecalis (E. faecalis).
- To establish a rapid and effective method for detecting E. faecalis in various sample types.
Main Methods:
- Synthesis of a new fluorogenic substrate, CFMU-Glu, based on a 7-hydroxycoumarin derivative (CFMU).
- Optimization of detection conditions, including pH, for almond β-glucosidase and E. faecalis using CFMU-Glu.
- Development of a fluorogenic broth (PBF-B) incorporating CFMU-Glu and polymyxin B for enhanced E. faecalis detection.
- Evaluation of detection limits using fluorescence microplate reader and naked eye observation.
- Testing the method's efficacy in real-world samples like drinking water, herbal tea, and milk.
Main Results:
- CFMU-Glu was successfully synthesized and demonstrated sensitive turn-on fluorescence for β-glucosidase activity.
- Optimal pH for almond β-glucosidase and E. faecalis detection with CFMU-Glu were determined as 6.50 and 7.00, respectively.
- The PBF-B broth significantly improved detection selectivity and signal intensity for E. faecalis.
- Low detection limits were achieved: 5.01 × 10⁴ CFU mL⁻¹ (fluorescence reader) and 1.0 × 10⁵ CFU mL⁻¹ (naked eye) for fluorogenic detection.
- A chromogenic detection limit of 1.0 × 10⁶ CFU mL⁻¹ (naked eye) was also established.
- The method successfully detected as low as 8 CFU mL⁻¹ of E. faecalis in drinking water, herbal tea, and milk within 10 hours, without pre-enrichment.
Conclusions:
- CFMU-Glu is a versatile and sensitive fluorogenic substrate for β-glucosidase activity and E. faecalis detection.
- The PBF-B broth, combined with CFMU-Glu and polymyxin B, offers a highly sensitive and selective method for E. faecalis detection.
- The developed method provides rapid, pre-enrichment-free detection of E. faecalis in diverse samples, with potential applications in food safety and clinical diagnostics.

