Enhancers of Host Immune Tolerance to Bacterial Infection Discovered Using Linked Computational and Experimental

Megan M Sperry1,2, Richard Novak1, Vishal Keshari1

  • 1Wyss Institute for Biologically Inspired Engineering at Harvard University, Boston, MA, 02115, USA.

Insights

This study explores host tolerance as an alternative to antibiotics for bacterial infections. Researchers identified conserved pathways and drugs that enhance host survival against pathogens.

Area of Science:

  • Infectious Diseases
  • Immunology
  • Computational Biology

Background:

  • Antibiotics reduce pathogen load but do not address host susceptibility.
  • Host tolerance offers an alternative therapeutic strategy by enhancing resilience to infection.
  • Xenopus laevis embryos serve as a model to study conserved infection responses.

Purpose of the Study:

  • Discover infection response pathways using computational transcriptomics.
  • Identify potential drugs that induce broad host tolerance to bacterial pathogens.
  • Validate the efficacy of identified drugs in a Xenopus embryo model.

Main Methods:

  • Utilized computational transcriptomics to analyze gene expression in Xenopus embryos.
  • Defined a 20-gene signature to differentiate tolerant and susceptible infection states.
  • Employed Xenopus embryo infection model with various bacterial species (A. baumannii, K. pneumoniae, S. aureus, S. pneumoniae, A. hydrophila, P. aeruginosa).

Main Results:

  • Xenopus showed natural tolerance to certain bacteria but susceptibility to others (A. hydrophila, P. aeruginosa).
  • Identified conserved gene pathways involved in host tolerance, including metal ion binding and hypoxia.
  • Administering deferoxamine (metal chelator) or 1,4-DPCA (HIF-1α agonist) improved survival in embryos infected with lethal A. hydrophila.

Conclusions:

  • Host tolerance is a viable alternative therapeutic strategy for bacterial infections.
  • Xenopus embryo model combined with multiomics is effective for discovering infection mechanisms and repurposing drugs.
  • Conserved pathways suggest potential for developing broad-acting tolerance-inducing therapies in mammals.

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