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Uncertainty: Overview00:59

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Quantifying Cytoskeleton Dynamics Using Differential Dynamic Microscopy
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Bagging, optimized dynamic mode decomposition for robust, stable forecasting with spatial and temporal uncertainty

Diya Sashidhar1, J Nathan Kutz1

  • 1Department of Applied Mathematics, University of Washington, Seattle, WA 98195-3925, USA.

Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences
|June 20, 2022
PubMed
Summary
This summary is machine-generated.

Bagging optimized dynamic mode decomposition (BOP-DMD) enhances model stability and forecasting by averaging an ensemble of optimized DMD models. This method provides robust spatial and temporal uncertainty quantification for probabilistic predictions.

Keywords:
dynamic mode decompositiondynamical systemsforecastingmodel discoveryuncertainty quantification

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Area of Science:

  • * Data-driven science
  • * Dynamical systems theory
  • * Machine learning for scientific modeling

Background:

  • * Dynamic Mode Decomposition (DMD) offers a regression framework for learning linear dynamics from temporal or spatio-temporal data.
  • * Standard DMD algorithms often suffer from bias errors due to noisy measurements, leading to inaccurate models and unstable forecasting.
  • * Optimized DMD (oDMD) minimizes bias using variable projection optimization for improved forecasting stability.

Purpose of the Study:

  • * To enhance the optimized DMD algorithm by incorporating statistical bagging methods.
  • * To develop a robust and stable model for probabilistic forecasting with uncertainty quantification.
  • * To introduce Bagging Optimized DMD (BOP-DMD) for improved performance in dynamical systems analysis.

Main Methods:

  • * Application of statistical bagging to create an ensemble of optimized DMD models from a single dataset.
  • * Averaging outputs from the ensemble of oDMD models to produce the final BOP-DMD model.
  • * Implementation of ensemble techniques for model stabilization, cross-validation, and robustness.

Main Results:

  • * BOP-DMD significantly improves model stability and forecasting capabilities compared to standard DMD algorithms.
  • * The ensembling approach robustifies the model against noise and measurement errors.
  • * BOP-DMD provides comprehensive spatial and temporal uncertainty quantification (UQ) metrics.

Conclusions:

  • * BOP-DMD offers a stable and robust framework for probabilistic (Bayesian) forecasting in dynamical systems.
  • * The method provides superior uncertainty quantification, enabling more reliable predictions.
  • * BOP-DMD represents a significant advancement for data-driven prediction in dynamical systems.