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In silico approaches in organ toxicity hazard assessment: Current status and future needs for predicting heart,
Arianna Bassan1, Vinicius M Alves2, Alexander Amberg3
1Innovatune srl, Via Giulio Zanon 130/D, 35129 Padova, Italy.
Abstract:
The kidneys, heart and lungs are vital organ systems evaluated as part of acute or chronic toxicity assessments. New methodologies are being developed to predict these adverse effects based on in vitro and in silico approaches. This paper reviews the current state of the art in predicting these organ toxicities. It outlines the biological basis, processes and endpoints for kidney toxicity, pulmonary toxicity, respiratory irritation and sensitization as well as functional and structural cardiac toxicities. The review also covers current experimental approaches, including off-target panels from secondary pharmacology batteries. Current in silico approaches for prediction of these effects and mechanisms are described as well as obstacles to the use of in silico methods. Ultimately, a commonly accepted protocol for performing such assessment would be a valuable resource to expand the use of such approaches across different regulatory and industrial applications. However, a number of factors impede their widespread deployment including a lack of a comprehensive mechanistic understanding, limited in vitro testing approaches and limited in vivo databases suitable for modeling, a limited understanding of how to incorporate absorption, distribution, metabolism, and excretion (ADME) considerations into the overall process, a lack of in silico models designed to predict a safe dose and an accepted framework for organizing the key characteristics of these organ toxicants.
Insights
New methods using *in vitro* and *in silico* approaches are emerging to predict kidney, heart, and lung toxicities. Challenges remain in mechanistic understanding and data integration for widespread adoption in toxicity assessments.
Area of Science:
- Toxicology
- Computational Biology
- Pharmacology
Background:
- Kidneys, heart, and lungs are critical organ systems assessed for toxicity.
- Adverse effects are currently evaluated through traditional toxicity assessments.
- Emerging *in vitro* and *in silico* methods offer predictive capabilities.
Purpose of the Study:
- To review the current state of art in predicting organ toxicities using *in vitro* and *in silico* methods.
- To outline biological basis, processes, and endpoints for kidney, pulmonary, and cardiac toxicities.
- To describe current experimental and *in silico* approaches and their limitations.
Main Methods:
- Review of current literature on *in vitro* and *in silico* toxicity prediction.
- Analysis of biological basis, processes, and endpoints for organ toxicities.
- Examination of experimental approaches including secondary pharmacology panels.
- Description of *in silico* prediction methods and associated obstacles.
Main Results:
- Detailed review of kidney, pulmonary, and cardiac toxicity assessment methodologies.
- Identification of current experimental and *in silico* approaches for toxicity prediction.
- Elucidation of obstacles hindering the widespread use of *in silico* methods.
Conclusions:
- A standardized protocol for organ toxicity assessment would be valuable for regulatory and industrial applications.
- Widespread deployment of predictive methods is impeded by lack of mechanistic understanding, limited *in vitro* data, and insufficient *in vivo* databases.
- Further development is needed in incorporating ADME, safe dose prediction models, and a framework for toxicant characteristics.
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