Related Experiment Video
Updated: Sep 7, 2025

Synthesis of a Borylated Ibuprofen Derivative Through Suzuki Cross-Coupling and Alkene Boracarboxylation Reactions
Published on: November 30, 2022
Isoindolin-1-ones Fused to Barbiturates: From Design and Molecular Docking to Synthesis and Urease Inhibitory
Houman Kazemzadeh1, Elham Hamidian1, Faezeh Sadat Hosseini1
1Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran 1416634793, Iran.
Abstract:
Helicobacter pylori-induced ulcers and gastric cancer have been one of the main obstacles that the human community has ever struggled with, especially in recent decades. Several different attempts have been made to eradicate this group. One of the most widely used attempts is to inhibit the critical enzyme that facilitates its survival, the urease enzyme. Therefore, in this study, isoindolin-1-ones fused to barbiturates were designed, synthesized, and evaluated for their in vitro urease inhibitory activity as novel inhibitors for the urease enzyme. The synthesis route consisted of two steps. These steps increased the yield rate and decreased the percentage of byproducts while approaching green chemistry using ethanol and water as green solvents and microwave irradiation instead of conventional methods. In vitro urease inhibitory results indicated that all the compounds had higher inhibitory activity than the standard inhibitor, thiourea, and compound 5b proved to be the most potent inhibitor (IC50 = 0.82 ± 0.03 μM). A molecular docking study was performed to understand the interaction between compounds 5a-n and Jack bean urease enzyme. The results of the molecular docking study were also in harmony with the in vitro results, which are discussed in detail later in this study.
Insights
Researchers developed novel isoindolin-1-one compounds to inhibit urease, an enzyme crucial for Helicobacter pylori survival. Compound 5b demonstrated potent urease inhibition, offering a promising strategy against H. pylori-related diseases.
Area of Science:
- Medicinal Chemistry
- Enzyme Inhibition
- Green Chemistry
Background:
- Helicobacter pylori infections cause significant gastric issues, including ulcers and cancer.
- Urease enzyme is essential for H. pylori survival and virulence.
- Developing effective urease inhibitors is a key therapeutic strategy.
Purpose of the Study:
- To design and synthesize novel isoindolin-1-one derivatives.
- To evaluate their in vitro urease inhibitory activity.
- To investigate their potential as anti-H. pylori agents.
Main Methods:
- Two-step synthesis utilizing green solvents (ethanol, water) and microwave irradiation.
- In vitro urease inhibition assays comparing synthesized compounds to thiourea.
- Molecular docking studies to elucidate binding interactions with Jack bean urease.
Main Results:
- All synthesized compounds exhibited higher urease inhibitory activity than thiourea.
- Compound 5b showed the most potent inhibition with an IC50 of 0.82 ± 0.03 μM.
- Molecular docking results correlated well with in vitro findings, supporting compound efficacy.
Conclusions:
- Novel isoindolin-1-one derivatives are effective urease inhibitors.
- Compound 5b represents a highly promising lead for developing new treatments against H. pylori.
- The employed green chemistry approach offers an efficient and sustainable synthesis route.
More Related Videos
Related Concept Videos
Sedatives and Hypnotics Drugs: Barbiturates
Indirect-Acting Cholinergic Agonists: Chemistry and Structure-Activity Relationship
Reversible inhibitors display short to medium durations of action. Short-acting agents include simple alcohols with...
ortho–para-Directing Activators: –CH3, –OH, –⁠NH2, –OCH3

