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Updated: Sep 7, 2025

Mass Cytometry Analysis of Systemic and Local Immune Responses in Hepatocellular Carcinoma
Published on: April 25, 2025
Mass cytometry reveals immune atlas of urothelial carcinoma
Qing Zhang1, Wenlong Zhang1, Tingsheng Lin1
1Department of Urology, Affiliated Drum Tower Hospital, Medical School of Nanjing University, Institute of Urology, Nanjing University, 321 Zhongshan Road, Nanjing, 210008, Jiangsu, China.
Abstract:
Immunotherapy has emerged as a robust clinical strategy for cancer treatment. PD1/PD-L1 inhibitors have been used as second-line therapy for urothelial carcinoma due to the high tumor mutational burden. Despite the efficacy of the treatment is significant, the response rate is still poor. The tumor immune microenvironment plays a key role in the regulation of immunotherapeutic efficacy. However, a comprehensive understanding of the intricate microenvironment in clinical samples remains unclear. To obtain detailed systematic tumor immune profile, we performed an in-depth immunoassay on 12 human urothelial carcinoma tissue samples and 14 paratumor tissue samples using mass cytometry. Among the large number of cells assayed, we identified 71 T-cell phenotypes, 30 tumor-associated macrophage phenotypes. T cell marker expression profiles showed that almost all T cells in the tumor tissue were in a state of exhaustion. CD38 expression on tumor-associated macrophages (TAMs) was significantly higher than PDL1, and CD38+ TAMs were closely associated with immunosuppression. CD38 may be a more suitable target for immunotherapy in urothelial carcinoma compared to PD1/PDL1. This single-cell analysis of clinical samples expands our insights into the immune microenvironment of urothelial carcinoma and reveals potential biomarkers and targets for immunotherapy development.
Insights
Immunotherapy for urothelial carcinoma shows limited response. This study reveals exhausted T cells and CD38+ tumor-associated macrophages (TAMs) in the tumor microenvironment, suggesting CD38 as a potential immunotherapy target.
Area of Science:
- Oncology
- Immunology
- Cell Biology
Background:
- Immunotherapy, particularly PD1/PD-L1 inhibitors, is a second-line treatment for urothelial carcinoma.
- Despite significant efficacy, response rates to current immunotherapies remain suboptimal.
- The tumor immune microenvironment critically influences immunotherapy outcomes, but its detailed profile in urothelial carcinoma is not well understood.
Purpose of the Study:
- To comprehensively characterize the tumor immune microenvironment in urothelial carcinoma.
- To identify novel biomarkers and therapeutic targets for improving immunotherapy efficacy.
- To investigate the role of T cells and tumor-associated macrophages in the context of immunotherapy.
Main Methods:
- Mass cytometry was employed for in-depth immunoassay on 12 urothelial carcinoma and 14 paratumor tissue samples.
- Single-cell analysis was used to identify diverse T-cell and tumor-associated macrophage phenotypes.
- Expression profiles of key immune markers, including PD1, PD-L1, CD38, and exhausted T-cell markers, were analyzed.
Main Results:
- Analysis revealed 71 T-cell phenotypes and 30 tumor-associated macrophage phenotypes.
- Almost all T cells within the tumor tissue exhibited markers of exhaustion.
- CD38 expression was significantly higher on tumor-associated macrophages (TAMs) compared to PD-L1, and CD38+ TAMs correlated with immunosuppression.
Conclusions:
- The tumor immune microenvironment in urothelial carcinoma is characterized by exhausted T cells and immunosuppressive CD38+ TAMs.
- CD38+ TAMs represent a potential therapeutic target, possibly offering advantages over PD1/PDL1 inhibition.
- This study provides valuable insights into the urothelial carcinoma immune landscape and identifies CD38 as a promising biomarker and target for future immunotherapy development.
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