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Oct4GiP Reporter Assay to Study Genes that Regulate Mouse Embryonic Stem Cell Maintenance and Self-renewal
Published on: May 30, 2012
OCT4, SOX2 and NANOG co-regulate glycolysis and participate in somatic induced reprogramming
Ying Ding1,2, Xia Yuan1,2, Yichen Zou1,2
1Key Laboratory of Animal Genetics, Breeding and Molecular Design of Jiangsu Province, College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009 China.
Abstract:
OCT4, SOX2 and NANOG (OSN) are the key factors of cell reprogramming, which are involved in the maintenance of stem cell pluripotency. Recently, it has been found that glycolysis plays an important role in the process of somatic-cell-induced reprogramming; however, the synergistic effect of OSN on glycolysis has rarely been reported. In this study, chicken embryonic fibroblasts (CEF) was reprogrammed into induced pluripotent stem cells (iPSCs) by OCT4, SOX2, NANOG and LIN28 reprogramming strategy. RNA-seq showed that chicken iPSCs highly expressed pluripotent genes and the expression of the key genes of glycolysis, such as Hk1, Pfkp and Ldha, was also at a high level, while CEF was much lower. Glycolysis gene expression, glucose uptake and lactate production of CEF and iPSCs were also detected. The results showed that the glycolysis level of iPSCs was higher than that of CEF. ChIP-qPCR showed that SOX2 and NANOG transcription factors were significantly enriched in the promoter regions of Hk1, Pfkp and Ldha, while OCT4 was not. The above results indicated that OCT4, SOX2 and NANOG coordinately regulate glycolysis and participate in somatic-cell-induced reprogramming, thus setting a good foundation for further research on the molecular mechanism of somatic-cell-induced reprogramming.
Supplementary Information:
The online version contains supplementary material available at 10.1007/s10616-022-00530-6.
Insights
OCT4, SOX2, and NANOG (OSN) transcription factors coordinate glycolysis regulation during somatic cell reprogramming into induced pluripotent stem cells (iPSCs). This study reveals OSN
Area of Science:
- Cell Biology
- Developmental Biology
- Metabolic Regulation
Background:
- OCT4, SOX2, and NANOG (OSN) are crucial for maintaining stem cell pluripotency.
- Glycolysis is increasingly recognized for its role in somatic cell reprogramming.
- The synergistic effects of OSN factors on glycolysis during reprogramming remain underexplored.
Purpose of the Study:
- To investigate the coordinated regulation of glycolysis by OSN factors during induced pluripotent stem cell (iPSC) generation.
- To elucidate the role of glycolysis in the reprogramming of chicken embryonic fibroblasts (CEFs) into iPSCs.
Main Methods:
- Reprogramming of CEFs into iPSCs using OCT4, SOX2, NANOG, and LIN28.
- RNA sequencing (RNA-seq) to analyze gene expression profiles.
- Measurement of glycolysis gene expression, glucose uptake, and lactate production.
- Chromatin immunoprecipitation followed by quantitative PCR (ChIP-qPCR) to assess transcription factor enrichment.
Main Results:
- Chicken iPSCs exhibited high expression of pluripotency genes and key glycolysis genes (Hk1, Pfkp, Ldha) compared to CEFs.
- iPSCs demonstrated significantly higher glycolysis levels, including glucose uptake and lactate production, than CEFs.
- ChIP-qPCR confirmed enrichment of SOX2 and NANOG at the promoter regions of glycolysis genes Hk1, Pfkp, and Ldha, but not OCT4.
Conclusions:
- OCT4, SOX2, and NANOG collectively regulate glycolysis during somatic cell reprogramming.
- Enhanced glycolysis is a characteristic feature of chicken iPSCs.
- These findings provide a foundation for understanding the molecular mechanisms of somatic cell reprogramming.
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