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Updated: Sep 6, 2025

Novel Sequence Discovery by Subtractive Genomics
Published on: January 25, 2019
Complete genome sequence and phylogenetic analysis of medicinal plant Abrus cantoniensis for evolutionary research
Shiqiang Xu1,2, Fangping Li1,3, Bingqi Wu1,3
1Guangdong Provincial Key Laboratory of Crops Genetics and Improvement, Crop Research Institute, Guangdong Academy of Agriculture Sciences, Guangzhou, 510640, China.
Abstract:
Abrus cantoniensis Hance, a native medicinal plant in southern China, is officially recorded in the Chinese Pharmacopoeia. Here, we presented the first high-quality genome in Abrus genus, A. cantoniensis genome, as well as the detailed genomic information. The assembled genome size was 381.27 Mb with a scaffold N50 of 18.95 Mb, and 98.97% of the assembled sequences were anchored on 11 pseudochromosomes. The A. cantoniensis genome comprised 25,058 protein-coding genes and 45.12% of the assemblies were repetitive sequences. Comparative genome analysis suggested that chromosome translocation and inversion played an important role in the differentiation of Abrus. In addition, 24 toxin-related genes were identified, which formed two tandem gene clusters on chromosomes 2 and 3. The chromosome-level genome of A. cantoniensis obtained in this work provides a valuable resource for understanding the evolution, active ingredient biosynthesis, and genetic improvement for A. cantoniensis and Abrus species.
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