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Identifying Patients With Delirium Based on Unstructured Clinical Notes: Observational Study.
Wendong Ge1, Haitham Alabsi1, Aayushee Jain1
1Massachusetts General Hospital, Boston, MA, United States.
JMIR Formative Research
|June 24, 2022
Summary
A new natural language processing (NLP) model accurately detects delirium in hospitalized patients using clinical notes, outperforming traditional billing codes. This advancement improves delirium research and patient care in electronic health records.
Area of Science:
- Medical Informatics
- Clinical Research
- Artificial Intelligence in Healthcare
Background:
- Delirium is an acute brain dysfunction in hospitalized patients.
- Current diagnostic codes (ICD) for delirium in electronic health records (EHRs) lack accuracy.
- Accurate delirium detection is crucial for research and quality improvement.
Purpose of the Study:
- To develop a more accurate method for detecting delirium episodes using natural language processing (NLP).
- To leverage unstructured clinical notes for improved delirium identification in EHRs.
Main Methods:
- Trained three NLP classifiers (SVM, RNN, Transformer) on 1.5 million clinical notes from over 10,000 patients.
- Utilized expert-labeled sentences for model training and external datasets for testing.
- Evaluated model performance using F1 scores, AUCs, and compared associations with ICD codes, medications, restraints, and mortality.
Main Results:
- The Transformer NLP model achieved high performance (micro F1=0.978, macro F1=0.918).
- NLP detections showed stronger correlations with deliriogenic medications, restraints, mortality, and CAM scores compared to ICD codes.
- NLP demonstrated superior accuracy in identifying delirium indicators.
Conclusions:
- Clinical notes offer a valuable data source for EHR-based delirium studies when analyzed with automated methods.
- The developed NLP model accurately detects delirium, comparable to manual chart review.
- This NLP approach enhances the determination of delirium for large-scale studies, quality improvement initiatives, and clinical trials.
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