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Updated: Sep 6, 2025

A Fluorogenic Peptide Cleavage Assay to Screen for Proteolytic Activity: Applications for coronavirus spike protein activation
Published on: January 9, 2019
Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery
Marie-Christine Vaney1, Mariano Dellarole1,2, Stéphane Duquerroy1,3
1Institut Pasteur, Université Paris Cité, CNRS UMR 3569, Unité de Virologie Structurale, Paris, France.
Abstract:
The flavivirus envelope glycoproteins prM and E drive the assembly of icosahedral, spiky immature particles that bud across the membrane of the endoplasmic reticulum. Maturation into infectious virions in the trans-Golgi network involves an acid-pH-driven rearrangement into smooth particles made of (prM/E)2 dimers exposing a furin site for prM cleavage into "pr" and "M". Here we show that the prM "pr" moiety derives from an HSP40 cellular chaperonin. Furthermore, the X-ray structure of the tick-borne encephalitis virus (pr/E)2 dimer at acidic pH reveals the E 150-loop as a hinged-lid that opens at low pH to expose a positively-charged pr-binding pocket at the E dimer interface, inducing (prM/E)2 dimer formation to generate smooth particles in the Golgi. Furin cleavage is followed by lid-closure upon deprotonation in the neutral-pH extracellular environment, expelling pr while the 150-loop takes the relay in fusion loop protection, thus revealing the elusive flavivirus mechanism of fusion activation.
Insights
Flavivirus maturation involves prM/E dimer rearrangement. The prM "pr" part originates from HSP40 chaperones, with the E 150-loop controlling this process and viral fusion.
Area of Science:
- Virology
- Structural Biology
- Cellular Biology
Background:
- Flavivirus assembly and maturation are critical for infectivity.
- Immature flavivirus particles bud from the endoplasmic reticulum and mature in the trans-Golgi network.
- Maturation involves structural rearrangements of envelope glycoproteins (prM and E) and prM cleavage.
Purpose of the Study:
- To elucidate the origin of the prM
- moiety during flavivirus maturation.
- To determine the structural mechanism of flavivirus maturation and fusion activation.
Main Methods:
- X-ray crystallography of tick-borne encephalitis virus (pr/E)2 dimer at acidic pH.
- Analysis of protein interactions and structural rearrangements.
Main Results:
- The prM
- moiety is derived from an HSP40 cellular chaperonin.
- The E 150-loop acts as a pH-sensitive hinged lid, exposing a binding pocket for
- at acidic pH.
- This interaction induces (prM/E)2 dimer formation and smooth particle generation in the Golgi.
- Lid closure and pr expulsion occur in the neutral extracellular environment, enabling fusion activation.
Conclusions:
- The study reveals a novel mechanism for flavivirus maturation involving HSP40 chaperones and pH-dependent structural changes of the E 150-loop.
- This provides insights into flavivirus entry and potential therapeutic targets.
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