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Updated: Sep 5, 2025

Novel Sequence Discovery by Subtractive Genomics
Published on: January 25, 2019
[Discovery and sequence analysis of a novel allele of A subtype]
Li Liu1, Xiansen Qiao, Zhihui Feng
1Institute of Transfusion Medicine, Qingdao Blood Center, Qingdao, Shandong 266071, China. qd_hla@163.com.
Objective:
To identify the genotypes of two probands with ambiguous blood serological typing and explore their serological feature and molecular basis.
Methods:
Serology assays including absorption-elution test were carried out. With genomic DNA extracted from peripheral blood samples, exons 6 and 7 of the ABO gene were subjected to cloning and haplotype sequencing analyses.
Results:
Red blood cells from the probands showed no agglutination with monoclonal anti-A and anti-B, whilst their serum showed weak agglutination with A1 cells and moderate agglutination with B cells. Absorption-elution test failed in detecting A antigen on such cells. Direct cloning sequencing analysis indicated that they were heterozygous for an ABO*O01.01 allele and a novel A allele. The novel A allele contained c.467C>T (p.Pro156Leu) and insertion of a nucleotide C at position 963_964 in exon 7 (c.963_964insC) compared with ABO*A1.01.
Conclusion:
Through serological and sequencing analysis, the two samples were identified as A subgroup due to novel A alleles.
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