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Updated: Sep 5, 2025

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
RGS10 suppression by DNA methylation is associated with low survival rates in colorectal carcinoma
Feyzanur Yildirimtepe Caldiran1, Ercan Cacan1
1Tokat Gaziosmanpasa University, Faculty of Arts and Sciences, Department of Molecular Biology and Genetics, Tokat, Turkey.
Abstract:
Colorectal cancer is known as the third most common cancer in both women and men. Genetic and epigenetic changes are major players contributing to colorectal carcinogenesis. Regulator of G-protein signaling 10 (RGS10) is a member of the RGS proteins, which negatively regulate several signaling pathways including cell survival and proliferation. We and others have previously shown that RGS10 expression is modulated by epigenetic modifications in ovarian cancer and suppression of RGS10 partially contributes to chemoresistance. Here, we further analyzed the roles and regulation of RGS10 in colon adenocarcinoma (COAD), using broad bioinformatics tools. We analyzed the expression profiles, promoter methylation state, prognostic value and effect of a hypomethylating agent on RGS10 expression. Results showed that RGS10 expression is higher in normal colon tissues than in tumor tissues. In addition, there is a negative correlation between DNA methylation and RGS10 transcript expression. We also observed that gene expression and promoter methylation of RGS10 in colorectal carcinoma patients were differently expressed depending on the tumor stage and microsatellite stability. DNA methylation was significantly increased in 18 probes of RGS10, which belongs to the high-risk group in COAD. In addition, pharmacological inhibition of DNA methyltransferase with decitabine reduced the six CpGsite-specific RGS10 hypermethylation in COAD. We also experimentally confirmed that RGS10 promoter activity was inhibited by treatment with decitabine in the HT-29 colorectal cell line. We further showed that decitabine treatment increases the RGS10 transcript expression in three different colorectal carcinoma cell lines. These results suggest that RGS10 expression is suppressed in the development of colorectal cancer and inhibition of DNA methylation may contribute to increasing overall survival rates of COAD patients.
Insights
Regulator of G-protein signaling 10 (RGS10) is suppressed in colorectal cancer due to DNA methylation. Inhibiting this methylation with decitabine may increase RGS10 expression and improve patient survival.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Colorectal cancer (CRC) is a leading cause of cancer death globally.
- Epigenetic alterations, particularly DNA methylation, play a critical role in CRC development.
- Regulator of G-protein signaling 10 (RGS10) is implicated in cancer progression and chemoresistance.
Purpose of the Study:
- To investigate the role and epigenetic regulation of RGS10 in colon adenocarcinoma (COAD).
- To analyze the correlation between RGS10 expression, DNA methylation, and clinical parameters in COAD patients.
Main Methods:
- Bioinformatic analysis of gene expression and promoter methylation data in COAD.
- Correlation analysis between RGS10 methylation/expression and tumor stage/microsatellite stability.
- In vitro experiments using decitabine (a hypomethylating agent) on COAD cell lines.
Main Results:
- RGS10 expression was significantly lower in COAD tissues compared to normal tissues.
- A negative correlation was observed between RGS10 DNA methylation and its transcript expression.
- RGS10 hypermethylation was associated with a high-risk group in COAD.
- Decitabine treatment reduced RGS10 promoter methylation and increased RGS10 expression in COAD cell lines.
Conclusions:
- RGS10 expression is epigenetically suppressed during colorectal cancer development.
- Inhibition of DNA methylation represents a potential therapeutic strategy to restore RGS10 expression in COAD.
- Restoring RGS10 expression may improve treatment outcomes and survival rates for COAD patients.
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