Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Protein Networks02:26

Protein Networks

4.1K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
4.1K
Circuit Terminology01:14

Circuit Terminology

2.1K
An electrical network is a system composed of interconnected elements, such as resistors, capacitors, inductors, and voltage or current sources. Unlike a circuit, an electrical network does not necessarily form a closed path. In other words, while all circuits can be considered networks due to their interconnected nature, not every network qualifies as a circuit.
A circuit, on the other hand, is also an interconnected system of electrical elements but must contain one or more closed paths.
2.1K
Protein-protein Interfaces02:04

Protein-protein Interfaces

13.1K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
13.1K
Resonance and Hybrid Structures02:16

Resonance and Hybrid Structures

17.9K
According to the theory of resonance, if two or more Lewis structures with the same arrangement of atoms can be written for a molecule, ion, or radical, the actual distribution of electrons is an average of that shown by the various Lewis structures.
Resonance Structures and Resonance Hybrids
The Lewis structure of a nitrite anion (NO2−) may actually be drawn in two different ways, distinguished by the locations of the N–O and N=O bonds.
17.9K
Noncovalent Attractions in Biomolecules02:35

Noncovalent Attractions in Biomolecules

53.8K
Noncovalent attractions are associations within and between molecules that influence the shape and structural stability of complexes. These interactions differ from covalent bonding in that they do not involve sharing of electrons.
Four types of noncovalent interactions are hydrogen bonds, van der Waals forces, ionic bonds, and hydrophobic interactions.
Hydrogen bonding results from the electrostatic attraction of a hydrogen atom covalently bonded to a strong-electronegative atom like oxygen,...
53.8K
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

6.4K
Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
6.4K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Complex network topological and spectral determinants of extreme events.

Chaos (Woodbury, N.Y.)·2026
Same author

Introduction to Focus Issue: Nonautonomous dynamical systems: Theory, methods, and applications.

Chaos (Woodbury, N.Y.)·2026
Same author

Transcript-based estimators for characterizing interactions.

Chaos (Woodbury, N.Y.)·2026
Same author

Noise Robustness of Transcript-Based Estimators for Properties of Interactions.

Entropy (Basel, Switzerland)·2025
Same author

Functional Importance Backbones of the Brain at Rest, Wakefulness, and Sleep.

Brain sciences·2025
Same author

Introduction to Focus Issue: Data-driven models and analysis of complex systems.

Chaos (Woodbury, N.Y.)·2025

Related Experiment Video

Updated: Sep 5, 2025

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics
07:28

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics

Published on: October 19, 2021

3.3K

Network structure from a characterization of interactions in complex systems.

Thorsten Rings1,2, Timo Bröhl3,4, Klaus Lehnertz5,6,7

  • 1Department of Epileptology, University Hospital Bonn, Venusberg Campus 1, 53127, Bonn, Germany. thorsten.rings@uni-bonn.de.

Scientific Reports
|July 11, 2022
PubMed
Summary

Functional networks derived from time-series analysis closely match structural network properties, especially key node centralities. However, global network characteristics like clustering and synchronizability show significant deviations, highlighting the need for refined analysis of complex systems.

More Related Videos

Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

1.2K
Author Spotlight: Advancing Large-Scale Neural Dynamics Through HD-MEA Technology
09:44

Author Spotlight: Advancing Large-Scale Neural Dynamics Through HD-MEA Technology

Published on: March 8, 2024

5.0K

Related Experiment Videos

Last Updated: Sep 5, 2025

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics
07:28

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics

Published on: October 19, 2021

3.3K
Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

1.2K
Author Spotlight: Advancing Large-Scale Neural Dynamics Through HD-MEA Technology
09:44

Author Spotlight: Advancing Large-Scale Neural Dynamics Through HD-MEA Technology

Published on: March 8, 2024

5.0K

Area of Science:

  • Complex Systems Science
  • Network Science
  • Dynamical Systems Theory

Background:

  • Complex dynamical systems are often modeled as networks, with vertices representing units and edges representing couplings.
  • When structural network edges are inaccessible, functional networks are derived from vertex interactions, but their correspondence to structural properties remains unclear.

Purpose of the Study:

  • To investigate the extent to which functional network properties match those of the underlying structural network.
  • To analyze the relationship between structure and function in complex dynamical systems using time-series analysis.

Main Methods:

  • Derivation of functional networks from characterizing interactions in paradigmatic oscillator networks.
  • Application of widely-used time-series analysis techniques to study collective network dynamics.
  • Evaluation of key network constituents (betweenness, eigenvector centrality) and global topological/spectral properties (clustering coefficient, average shortest path length, assortativity, synchronizability).

Main Results:

  • Key functional network constituents, specifically betweenness and eigenvector centrality, show high congruence with structural network ground truth.
  • Global topological and spectral properties of functional networks, including clustering coefficient, average shortest path length, assortativity, and synchronizability, significantly deviate from structural counterparts.
  • Similar findings were observed for an empirical network, confirming the robustness of the results.

Conclusions:

  • Functional networks derived from time-series data can accurately capture local structural properties, particularly node importance.
  • Global network properties derived from functional data may not reliably reflect the underlying structural network.
  • Findings necessitate conceptual and methodological refinements for a deeper understanding of structure-function relationships in complex dynamical systems.