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Updated: Sep 4, 2025

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors
Published on: April 29, 2022
Structure of the MRAS-SHOC2-PP1C phosphatase complex
Zachary J Hauseman1, Michelle Fodor2, Anxhela Dhembi2
1Novartis Institutes for BioMedical Research, Cambridge, MA, USA. zachary.hauseman@novartis.com.
Abstract:
RAS-MAPK signalling is fundamental for cell proliferation and is altered in most human cancers1-3. However, our mechanistic understanding of how RAS signals through RAF is still incomplete. Although studies revealed snapshots for autoinhibited and active RAF-MEK1-14-3-3 complexes4, the intermediate steps that lead to RAF activation remain unclear. The MRAS-SHOC2-PP1C holophosphatase dephosphorylates RAF at serine 259, resulting in the partial displacement of 14-3-3 and RAF-RAS association3,5,6. MRAS, SHOC2 and PP1C are mutated in rasopathies-developmental syndromes caused by aberrant MAPK pathway activation6-14-and SHOC2 itself has emerged as potential target in receptor tyrosine kinase (RTK)-RAS-driven tumours15-18. Despite its importance, structural understanding of the SHOC2 holophosphatase is lacking. Here we determine, using X-ray crystallography, the structure of the MRAS-SHOC2-PP1C complex. SHOC2 bridges PP1C and MRAS through its concave surface and enables reciprocal interactions between all three subunits. Biophysical characterization indicates a cooperative assembly driven by the MRAS GTP-bound active state, an observation that is extendible to other RAS isoforms. Our findings support the concept of a RAS-driven and multi-molecular model for RAF activation in which individual RAS-GTP molecules recruit RAF-14-3-3 and SHOC2-PP1C to produce downstream pathway activation. Importantly, we find that rasopathy and cancer mutations reside at protein-protein interfaces within the holophosphatase, resulting in enhanced affinities and function. Collectively, our findings shed light on a fundamental mechanism of RAS biology and on mechanisms of clinically observed enhanced RAS-MAPK signalling, therefore providing the structural basis for therapeutic interventions.
Insights
Researchers determined the structure of the MRAS-SHOC2-PP1C complex, revealing a multi-molecular mechanism for RAS-MAPK pathway activation crucial in cancer and developmental disorders.
Area of Science:
- Molecular Biology
- Structural Biology
- Cell Signaling
Background:
- RAS-MAPK signaling is vital for cell proliferation and frequently altered in human cancers.
- The precise mechanism of RAS signaling through RAF, particularly intermediate activation steps, remains incompletely understood.
- The MRAS-SHOC2-PP1C holophosphatase complex plays a key role in RAF dephosphorylation and activation, with mutations linked to rasopathies and cancer.
Purpose of the Study:
- To elucidate the structural basis of the MRAS-SHOC2-PP1C holophosphatase complex.
- To understand the molecular mechanisms underlying RAS-driven RAF activation.
- To investigate how mutations in this complex contribute to disease pathogenesis.
Main Methods:
- X-ray crystallography was employed to determine the high-resolution structure of the MRAS-SHOC2-PP1C complex.
- Biophysical characterization techniques were used to assess complex assembly and dynamics.
- Analysis of mutation sites within the context of the determined structure.
Main Results:
- The crystal structure reveals SHOC2 acting as a scaffold, bridging MRAS and PP1C, facilitating interactions between all three components.
- Complex assembly is cooperatively driven by the active, GTP-bound state of MRAS, a mechanism applicable to other RAS isoforms.
- Mutations associated with rasopathies and cancer were found at protein-protein interfaces, enhancing complex stability and function.
Conclusions:
- The study presents a multi-molecular model for RAF activation, driven by RAS-GTP, involving the recruitment of RAF-14-3-3 and the SHOC2-PP1C holophosphatase.
- The findings provide critical structural insights into RAS-MAPK pathway regulation and the molecular basis of diseases caused by its aberrant activation.
- This structural understanding offers a foundation for developing targeted therapeutic interventions for RAS-driven cancers and rasopathies.
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