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Updated: Sep 4, 2025

High-Resolution Complexome Profiling by Cryoslicing BN-MS Analysis
Published on: October 15, 2019
Structure-function analysis of the SHOC2-MRAS-PP1C holophosphatase complex
Jason J Kwon1,2,3, Behnoush Hajian4, Yuemin Bian4
1Cancer Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Abstract:
Receptor tyrosine kinase (RTK)-RAS signalling through the downstream mitogen-activated protein kinase (MAPK) cascade regulates cell proliferation and survival. The SHOC2-MRAS-PP1C holophosphatase complex functions as a key regulator of RTK-RAS signalling by removing an inhibitory phosphorylation event on the RAF family of proteins to potentiate MAPK signalling1. SHOC2 forms a ternary complex with MRAS and PP1C, and human germline gain-of-function mutations in this complex result in congenital RASopathy syndromes2-5. However, the structure and assembly of this complex are poorly understood. Here we use cryo-electron microscopy to resolve the structure of the SHOC2-MRAS-PP1C complex. We define the biophysical principles of holoenzyme interactions, elucidate the assembly order of the complex, and systematically interrogate the functional consequence of nearly all of the possible missense variants of SHOC2 through deep mutational scanning. We show that SHOC2 binds PP1C and MRAS through the concave surface of the leucine-rich repeat region and further engages PP1C through the N-terminal disordered region that contains a cryptic RVXF motif. Complex formation is initially mediated by interactions between SHOC2 and PP1C and is stabilized by the binding of GTP-loaded MRAS. These observations explain how mutant versions of SHOC2 in RASopathies and cancer stabilize the interactions of complex members to enhance holophosphatase activity. Together, this integrative structure-function model comprehensively defines key binding interactions within the SHOC2-MRAS-PP1C holophosphatase complex and will inform therapeutic development .
Insights
The SHOC2-MRAS-PP1C complex regulates cell signaling. Researchers determined its structure, revealing how mutations in RASopathies enhance its activity and offering insights for cancer therapy development.
Area of Science:
- Molecular Biology
- Structural Biology
- Biochemistry
Background:
- Receptor tyrosine kinase (RTK)-RAS signaling, involving the mitogen-activated protein kinase (MAPK) cascade, controls cell proliferation and survival.
- The SHOC2-MRAS-PP1C holophosphatase complex is crucial for RTK-RAS signaling by dephosphorylating RAF proteins, thereby activating MAPK signaling.
- Germline gain-of-function mutations in this complex cause RASopathy syndromes, but its structure and assembly remain unclear.
Purpose of the Study:
- To elucidate the structure and assembly of the SHOC2-MRAS-PP1C holophosphatase complex.
- To define the biophysical principles governing holoenzyme interactions and complex assembly order.
- To investigate the functional impact of SHOC2 variants using deep mutational scanning.
Main Methods:
- Cryo-electron microscopy (cryo-EM) was employed to determine the high-resolution structure of the SHOC2-MRAS-PP1C complex.
- Deep mutational scanning was performed to assess the functional consequences of numerous SHOC2 missense variants.
- Biophysical techniques were used to analyze holoenzyme interactions and assembly.
Main Results:
- The study resolved the structure of the SHOC2-MRAS-PP1C complex, detailing interactions between SHOC2, MRAS, and PP1C.
- SHOC2 interacts with MRAS and PP1C via its leucine-rich repeat region and N-terminal disordered region, respectively.
- Complex assembly initiates with SHOC2-PP1C binding, stabilized by GTP-loaded MRAS, explaining how RASopathy mutations enhance activity.
Conclusions:
- This work provides a comprehensive structure-function model of the SHOC2-MRAS-PP1C holophosphatase complex.
- The findings clarify how mutations associated with RASopathies and cancer enhance complex activity.
- The detailed understanding of binding interactions may guide the development of targeted therapeutics.
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